y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000303770 |
Family | CBM43 |
Protein Properties | Length: 1706 Molecular Weight: 187228 Isoelectric Point: 9.5981 |
Chromosome | Chromosome/Scaffold: 018713103 Start: 23266 End: 32957 |
Description | Plant protein of unknown function (DUF936) |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 326 | 407 | 1.6e-24 |
WCILDPKVKYLDXLAKSMDYACTLSDCTSLGYGSSCNNLSLQGNASYAFNMYYQVNXQKSWTCNFSGLAVVTDXDPSVGDCE | |||
GH17 | 29 | 310 | 0 |
GVNWGTMATHQLPPKKVVRMLEDNGFXKLKLFEADGRILSALIGTKIEVMLAVPNFMLQEMSQDPVAADTWVDANVTSYCYXGGVNIKYVAVGNEPFLKT YNGTYLQTTLPALKNIQEALNNAGLGSQVKATVPFNADIYFSPDSXPVPSTGDFRPXIRDSIIXILQYLNTNEAXFTVNIYPFLSLYGNTYFPFGFAFFD GTSKPIKDGNLLYTNVFDANFDTLLWSLTKAGFXEMKIIVGEVGWPTDGDINANIGNAKRFNQGMIQHALSGDGTPARKGKL |
Full Sequence |
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Protein Sequence Length: 1706 Download |
MSQERVHLLA LVLILLVFVT MVEKGAXFGV NWGTMATHQL PPKKVVRMLE DNGFXKLKLF 60 EADGRILSAL IGTKIEVMLA VPNFMLQEMS QDPVAADTWV DANVTSYCYX GGVNIKYVAV 120 GNEPFLKTYN GTYLQTTLPA LKNIQEALNN AGLGSQVKAT VPFNADIYFS PDSXPVPSTG 180 DFRPXIRDSI IXILQYLNTN EAXFTVNIYP FLSLYGNTYF PFGFAFFDGT SKPIKDGNLL 240 YTNVFDANFD TLLWSLTKAG FXEMKIIVGE VGWPTDGDIN ANIGNAKRFN QGMIQHALSG 300 DGTPARKGKL DAXEXVEDVE YMLRSWCILD PKVKYLDXLA KSMDYACTLS DCTSLGYGSS 360 CNNLSLQGNA SYAFNMYYQV NXQKSWTCNF SGLAVVTDXD PSVGDCEFPV MISKISCNKK 420 NLHFRFNEEN FHFRFNHVQD FKINLQRAYG LSDEEHLTLY SDNSIKVKKC KGNPANRRSE 480 IERXSFRASR IGFVSRSRHL SMGRRAAAAV VGSSTDLDLR RRFNRSSTKG LPRLGSGFTT 540 LPRSLESSHN RSALKYLLWY SPVAKRTSVF DDPALEIQEL TAAIKQDITG LNSALIELQL 600 HCNSQNESGN ISSDTTTHST TVVDNLKNRL MSATKEFKEV LTMRTENLKV HENRRQLFSS 660 TTSKESTNPF VRQRPVAARS AANASTAPPP WANDSASSSQ LFPRKQTDKE SRPLLQQQQQ 720 QVVEQQDTYM HSRSEALQNV ESTIHELGNI FTQLATMVSQ QGELAIRIDE SMDETLSNVE 780 GAQGQLARKG LSNGTWCATV SSGTNDIVXC XNFSHYXVLL AQDVTVAYRE CRFNPPPSLS 840 VSLRRTTMAS LTPGILLKLL QSMNSATKVT GDHRSALLQV IGIVPALAGS DLSSNQGFYV 900 QLSDSLNSTY VSLSDXDTDL ILTNRLQLGQ FAYVDRFNFD SPVPRVLGIR RIAGRHPFLG 960 TPEPLVARFS TSKREFVIQP VSDSDQSADF MAIYLSNKQQ EQVVRNDNKE AKIEKARPSR 1020 QPLAPRDNVN TGGNLNSNSI SDEAKKISDR PASRFSSPAG AKRSVSVGKK NPASAERDPS 1080 LAGKGKRSGS PAPSKCVVPS LIVAKEEDRK ASKEAAIIVP SRYRQPSPVG QRRQPSPNAR 1140 RASLSPGRRL SGGVKDSAAK KKMAGIVAGI SKVSEALIGS GKGNRKGWDE SPAVXQKEKP 1200 AAKNKPDLQS FIRTQAALAR RLSDAKGGIP NGGDDSSSNE KTKSGSLKDL VVQERPSCAA 1260 APGITVHXKK WTDGSVSLDA VSSDLARLGK EALQRKVLAS AAAAEALEEA IATESLVRKL 1320 SMFAELASTS KVGSPLPAID RFFSIYDEVV KSTTLTESIA SNRNSDTCYN DQIPTEQSKP 1380 VSLWVEAALA TDLSVVSLLA AQDNETPSAL QKSLSKRRYT PAKSHLKISP SSPQSTAGVG 1440 TWMKGHGMKE TVELAVSLQS EMQMWFLQFV EKALDAGFRV FGECAANGGK LPIDCGSIAA 1500 VLSQLKRVNE WLDGVVSRRN ELNEKPDNGX GDRRKSFPGR HALAAMIAEN GAGSLDTIEQ 1560 PDEKSGSKSY AWKPDASLIL TAPSPTHTKK TLAKIQANRP HAEPSISTAH QNLQRKPIQR 1620 LGFTHTPVRD SYIKPLTDSH ALCPFGLKIL RLFHSSAELT ETXRFVLFPL SDXHQPQSTN 1680 LRIQNPSQNP KSISLHHFRF CPTHPA 1740 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05739 | SNARE | 2.0e-14 | 733 | 788 | 56 | + SNARE domain. Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery, the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex. | ||
pfam07983 | X8 | 2.0e-15 | 325 | 395 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-29 | 325 | 408 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-57 | 29 | 309 | 282 | + Glycosyl hydrolases family 17. | ||
pfam06075 | DUF936 | 4.0e-123 | 851 | 1537 | 690 | + Plant protein of unknown function (DUF936). This family consists of several hypothetical proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005515 | protein binding |
GO:0005975 | carbohydrate metabolic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28115.1 | 0 | 848 | 1522 | 1 | 624 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_193073.1 | 0 | 848 | 1517 | 1 | 636 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002281524.1 | 0 | 848 | 1522 | 1 | 672 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324965.1 | 0 | 848 | 1522 | 1 | 674 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515571.1 | 0 | 848 | 1522 | 1 | 651 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 2e-37 | 29 | 309 | 2 | 274 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 5e-36 | 29 | 306 | 3 | 274 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 5e-36 | 29 | 306 | 3 | 274 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 5e-36 | 29 | 306 | 3 | 274 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 5e-36 | 29 | 306 | 3 | 274 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |