y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000254562 |
Family | CBM43 |
Protein Properties | Length: 515 Molecular Weight: 56373.6 Isoelectric Point: 8.7098 |
Chromosome | Chromosome/Scaffold: 021796260 Start: 45 End: 2478 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 398 | 477 | 1.1e-24 |
WCVVNNNGDLSNATASASEACSHADCSAMSPGGSCSNISWPGNISYAFNSYYQQHNQSADSCDFGGLGLITTVNPSVDNC | |||
GH17 | 22 | 378 | 0 |
IGVNWGTTASHPLPPAKVVELLKSNNVTKVKLFDADPGVLGALSGSKLSVTVGIPNALLKSLNSSKKAAESWVHDNVTRYVSNGGGGGVKIDLMYMKRTT NERGPCRNLRHYVFQSRCLNITSRYVAVGDESFLQSYGEQFHPFVXGAAMNIHTALARAKLESNVKVVVPCSFDSFLSESGHPSKGHFRADLNRTMIXLL TFLSKHNSPFFATISPFXSLRQNKNISLDFTLFKDNAKPHNDSRKTYKNSFDLSXDTLVTALSTVGFPKMEIVVSQIGWPTDGAANATSSTAETFMKGLM AHLRSKSGTPLRPRNPPSETYVFSLLDEDQRSISXGNFERHWGVFTFDGQAKYRFDF |
Full Sequence |
---|
Protein Sequence Length: 515 Download |
MPPNLCTLLF VLATTVSTCG AIGVNWGTTA SHPLPPAKVV ELLKSNNVTK VKLFDADPGV 60 LGALSGSKLS VTVGIPNALL KSLNSSKKAA ESWVHDNVTR YVSNGGGGGV KIDLMYMKRT 120 TNERGPCRNL RHYVFQSRCL NITSRYVAVG DESFLQSYGE QFHPFVXGAA MNIHTALARA 180 KLESNVKVVV PCSFDSFLSE SGHPSKGHFR ADLNRTMIXL LTFLSKHNSP FFATISPFXS 240 LRQNKNISLD FTLFKDNAKP HNDSRKTYKN SFDLSXDTLV TALSTVGFPK MEIVVSQIGW 300 PTDGAANATS STAETFMKGL MAHLRSKSGT PLRPRNPPSE TYVFSLLDED QRSISXGNFE 360 RHWGVFTFDG QAKYRFDFIQ GSKNLVDAQN VEYLPAKWCV VNNNGDLSNA TASASEACSH 420 ADCSAMSPGG SCSNISWPGN ISYAFNSYYQ QHNQSADSCD FGGLGLITTV NPSVDNCRFS 480 VQLRTSLSDS FRPDYLSLWM TLLVTTLLLS LPRFT 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 290 | 369 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-17 | 397 | 465 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-31 | 397 | 479 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-64 | 22 | 378 | 358 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95444.1 | 0 | 22 | 503 | 35 | 480 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI28434.1 | 0 | 1 | 511 | 1 | 481 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200656.2 | 0 | 12 | 499 | 16 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002269108.1 | 0 | 21 | 508 | 25 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 18 | 509 | 18 | 476 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 5.60519e-45 | 22 | 378 | 2 | 315 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_C | 5.60519e-45 | 22 | 378 | 2 | 315 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_B | 5.60519e-45 | 22 | 378 | 2 | 315 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_A | 5.60519e-45 | 22 | 378 | 2 | 315 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3em5_D | 5.60519e-45 | 22 | 378 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |