y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000180536 |
Family | CBM43 |
Protein Properties | Length: 489 Molecular Weight: 54012.2 Isoelectric Point: 4.565 |
Chromosome | Chromosome/Scaffold: 005781213 Start: 14205 End: 15913 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 452 | 2.3e-27 |
WCVLDPDAKSLDDLAKSIDYACTLSDCTSLGYGSSCNNLTLQGNASYAFNMYYQVNSQKSWTCDFSGLAVVTDEDPSVGDCE | |||
GH17 | 29 | 348 | 0 |
GVNWGTMATHQLPPEKVVRILEDNGFDKVKLFEADERILAALTGTKIEVMLAIPNVMLQEMSQDXVAAATWVDANVTSYCYSGGVVIKYVAVGNEPFLKT YNGTYLQTTLPALKNIQEALNNAGLGSQVKATVPFNADXYFSPDSDPVPSTGDFRPEVRDSIIKIIQYLXTNEAPFTVNIYPFLSLYGNSYFPFGFAFFD GKSKPIKDGDLLYTNVFDANFDTLVWSLTKAGFPEMKIIVGEVGWPTDGDINANIRNAKXFNQGMIQHAMSGNGTPARTGKLDGYLFSLIDENMKSIAPG NFERHWGIFEYDGKPKYDLD |
Full Sequence |
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Protein Sequence Length: 489 Download |
MSQERVHLLT LVLILLVFXT MVXKGASFGV NWGTMATHQL PPEKVVRILE DNGFDKVKLF 60 EADERILAAL TGTKIEVMLA IPNVMLQEMS QDXVAAATWV DANVTSYCYS GGVVIKYVAV 120 GNEPFLKTYN GTYLQTTLPA LKNIQEALNN AGLGSQVKAT VPFNADXYFS PDSDPVPSTG 180 DFRPEVRDSI IKIIQYLXTN EAPFTVNIYP FLSLYGNSYF PFGFAFFDGK SKPIKDGDLL 240 YTNVFDANFD TLVWSLTKAG FPEMKIIVGE VGWPTDGDIN ANIRNAKXFN QGMIQHAMSG 300 NGTPARTGKL DGYLFSLIDE NMKSIAPGNF ERHWGIFEYD GKPKYDLDLS GAMRNKGLAA 360 AEDVEYMQRS WCVLDPDAKS LDDLAKSIDY ACTLSDCTSL GYGSSCNNLT LQGNASYAFN 420 MYYQVNSQKS WTCDFSGLAV VTDEDPSVGD CEFPVMISYA APSLLHSRGL LHFVMKIVGG 480 FLLYLMILL 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-5 | 266 | 340 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-18 | 370 | 440 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-33 | 370 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-72 | 29 | 348 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28113.1 | 0 | 11 | 487 | 530 | 977 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189076.1 | 0 | 7 | 487 | 16 | 497 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002281500.1 | 0 | 11 | 488 | 12 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324967.1 | 0 | 26 | 466 | 7 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515573.1 | 0 | 14 | 488 | 16 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 349 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 350 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 29 | 350 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 29 | 350 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 29 | 350 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |