y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000151462 |
Family | CBM53 |
Protein Properties | Length: 1092 Molecular Weight: 124795 Isoelectric Point: 7.275 |
Chromosome | Chromosome/Scaffold: 01555481 Start: 2737 End: 9056 |
Description | starch synthase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM53 | 257 | 340 | 6.4e-29 |
QDIEVFLNRSISTLSNEPDVQIMGAFNDWRWKSFTFRLNKTQLKGDWWSCQFHVPKESYKIDFVFFNGQNVYDNNDAKDFCITV | |||
CBM53 | 433 | 521 | 1.8e-33 |
LVKLYYNRGSGPLANAKELWIHGGHNGWKDGLSIVERLVSSERKDGDWWYANVVVPEQAIVLDWVFADGPPQNAVLYDNNHRHDFHAIV | |||
CBM53 | 594 | 681 | 7.9e-34 |
NKVTVFYNPANTVLNGKPEVWXRGSFNRWTHRKGPLQPQKMLPTENGSHVKTTVSVPLDAYMMDFVFSETEDGGLFDNKNGMDYHIPV | |||
GT5 | 690 | 1061 | 0 |
PMNIVGGLGDVVTSLSRAVQDLNHHVDIILPKYDCLNLSNVKEFQYXRGFSWGGTEIKVWFGKVEGVSVYFLEPQNGFFHAGCIYGCKNDAERFGFFCHA ALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYMHYGLSKARVVFTIHNLEFGAPFIGKAVAYSDKSTTVSNTYAKEVSGNPAVAPHLYKFHGIINGIDQ DIWDPYNDKFIPISYTSENVVEGKQAAKEALQQRLGLKKADLPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSH ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSIPVVRKTGGLYDTVFDVDHDKERANA |
Full Sequence |
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Protein Sequence Length: 1092 Download |
MEVSVQAQRP LSCRGLFQXR RTILXLQPFT GFXPHXRIGL KYKNFYFLGS DGFAFPYSSW 60 FKGNLTSGVS YQITASSAEF SRRRQRKVSP XSKGLVPETP XGTSVQKTNQ RNTGDEKGMT 120 SLXSSELAGK NKKTHQSRVD TRREWAVEPS EESKVDEKRI DETSSKVEES PSVGKQTAID 180 RGIRGIENGX VGKALDDISD TDKGIDTDKK LTNEDPLKLK LEREEKLRKE EIARLAEENF 240 SRGNKIFFYP QVVKPDQDIE VFLNRSISTL SNEPDVQIMG AFNDWRWKSF TFRLNKTQLK 300 GDWWSCQFHV PKESYKIDFV FFNGQNVYDN NDAKDFCITV EGGMDLFAFE DFLLEEKRKE 360 QEKLXKEQAE RERQAEEQRR IEAEKAASEA DRAQAKAEII KRRQMVQELX KKAVRSVEDV 420 WYIEPKEFKG EDLVKLYYNR GSGPLANAKE LWIHGGHNGW KDGLSIVERL VSSERKDGDW 480 WYANVVVPEQ AIVLDWVFAD GPPQNAVLYD NNHRHDFHAI VPKSIPEELY WVEEEHQIYK 540 KLQEERRLRE EAIRAKAERT ARMKAEMKER TFKRFLLSQK HIVYTEPLDV QAGNKVTVFY 600 NPANTVLNGK PEVWXRGSFN RWTHRKGPLQ PQKMLPTENG SHVKTTVSVP LDAYMMDFVF 660 SETEDGGLFD NKNGMDYHIP VFGGXXKESP MNIVGGLGDV VTSLSRAVQD LNHHVDIILP 720 KYDCLNLSNV KEFQYXRGFS WGGTEIKVWF GKVEGVSVYF LEPQNGFFHA GCIYGCKNDA 780 ERFGFFCHAA LEFLLQSGFH PDIIHCHDWS SAPVAWLFKD HYMHYGLSKA RVVFTIHNLE 840 FGAPFIGKAV AYSDKSTTVS NTYAKEVSGN PAVAPHLYKF HGIINGIDQD IWDPYNDKFI 900 PISYTSENVV EGKQAAKEAL QQRLGLKKAD LPVVGIITRL THQKGIHLIK HAIWRTLERN 960 GQVVLLGSAP DPRIQNDFVN LANQLHSSHA DRARLCLTYD EPLSHLIYAG ADFILVPSIF 1020 EPCGLTQLIA MRYGSIPVVR KTGGLYDTVF DVDHDKERAN AQGVEPNVSA LMELMLLVSI 1080 MLLIGVYMFF RR 1140 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02939 | PLN02939 | 4.0e-119 | 689 | 1055 | 416 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 1.0e-125 | 689 | 1060 | 415 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PRK00654 | glgA | 1.0e-139 | 694 | 1060 | 405 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-150 | 694 | 1073 | 428 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
PLN02316 | PLN02316 | 0 | 89 | 1067 | 995 | + synthase/transferase |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
GO:2001070 | starch binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT09059.1 | 0 | 197 | 1067 | 286 | 1168 | starch synthase III precursor [Solanum lycopersicum] |
DDBJ | BAF49176.1 | 0 | 1 | 1067 | 1 | 1103 | starch synthase III [Phaseolus vulgaris] |
RefSeq | XP_002269011.1 | 0 | 1 | 1067 | 1 | 1080 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305571.1 | 0 | 80 | 1067 | 1 | 957 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518476.1 | 0 | 90 | 1067 | 9 | 998 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0 | 690 | 1051 | 12 | 407 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 690 | 1052 | 12 | 408 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 690 | 1052 | 12 | 408 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 0 | 690 | 1052 | 12 | 408 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 0 | 690 | 1052 | 12 | 408 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |