y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000139990 |
Family | CBM43 |
Protein Properties | Length: 498 Molecular Weight: 54541 Isoelectric Point: 8.2465 |
Chromosome | Chromosome/Scaffold: 009047305 Start: 3606 End: 5687 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 368 | 447 | 2e-25 |
WCVAKPSGDLSDVANHMKLACSVADCTTLTYGGSCNGIGAKGNISYAFNSYYQLQMQNERSCDFDGLGVVTFLDPSVGEC | |||
GH17 | 29 | 347 | 0 |
IGVNWGSVSFHKLKPSAVVDLLKDNKISKVKLFDADPDSLRALMGSGIQVMVGIPNEMLAALSSSTDASDLWVRQNVSRYMVKNGADIRYIAVGNEPFLS SYSGQFQSYVMPALLNLQQSLAKVNLASYVKLVVPCNADAYESSLPSQGAFRPELTQIMTQLVSFLNSNGSPFVVNIYPFLSLYGSSDFPQDYAFFEGTS HPVTDGSNVYSNAFDGNFDTLVAALSKLGYGEMPIIIGEVGWPTDGAINANLTAARVFNQGLINHVLSNRGTPLRPGAPPVDVYIFSLHDEGAKSTLPGN FERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 498 Download |
MLEARWRWRW TFAAALLSLV VVWRAESAIG VNWGSVSFHK LKPSAVVDLL KDNKISKVKL 60 FDADPDSLRA LMGSGIQVMV GIPNEMLAAL SSSTDASDLW VRQNVSRYMV KNGADIRYIA 120 VGNEPFLSSY SGQFQSYVMP ALLNLQQSLA KVNLASYVKL VVPCNADAYE SSLPSQGAFR 180 PELTQIMTQL VSFLNSNGSP FVVNIYPFLS LYGSSDFPQD YAFFEGTSHP VTDGSNVYSN 240 AFDGNFDTLV AALSKLGYGE MPIIIGEVGW PTDGAINANL TAARVFNQGL INHVLSNRGT 300 PLRPGAPPVD VYIFSLHDEG AKSTLPGNFE RHWGIFSFDG QAKYPLNLGL GGRRLKNARN 360 VEYLPSRWCV AKPSGDLSDV ANHMKLACSV ADCTTLTYGG SCNGIGAKGN ISYAFNSYYQ 420 LQMQNERSCD FDGLGVVTFL DPSVGECRFL VGVTDTSSRS RSRSKSRSST SSSSGHQLYR 480 RWIIVGMLIS WGVWVFVM 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 202 | 339 | 142 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-18 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 368 | 449 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-69 | 29 | 345 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10499.1 | 0 | 15 | 498 | 38 | 502 | glucanase like protein [Arabidopsis thaliana] |
EMBL | CAN82722.1 | 0 | 25 | 462 | 2 | 439 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_193451.2 | 0 | 15 | 498 | 11 | 475 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 26 | 498 | 26 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 12 | 498 | 4 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 29 | 348 | 1 | 306 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1aq0_B | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 29 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 1.4013e-45 | 29 | 348 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |