y
Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_10437241g0010 |
Family | CBM53 |
Protein Properties | Length: 764 Molecular Weight: 87264.6 Isoelectric Point: 7.0452 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM53 | 202 | 286 | 3.6e-29 |
GQEIEIFLNRSITTLAIEPTVLIMGAFNDWKWNSFITELQKSELNGDWWTCKLFIPKQTYKIDFVFFNGGKVYENNDRKDFSIAV | |||
GT5 | 640 | 761 | 1e-31 |
HIVHIAVEMAPIAKVGGLADVVTSLSRAVQELGHNAEIICPKYDCLDYSKVHNLQFRREFSWGGTKIKVWHGNVEGLSVYFIEPGNGMFWAGCIYGRKDD GQRFGFFCNAALEFLLQSGLHP | |||
CBM53 | 377 | 467 | 2.5e-33 |
GDRVKLYYNRSSRPLAFSSEVWIHGGYNNWVDALTIVQKLSYDSAENGDWWTVDVVVPEQAFVLDWVFADGPPGSAKVYDNNSYRDFHAIV | |||
CBM53 | 540 | 629 | 3.7e-35 |
NSVTVFYNPSNTVLNGKSEVWIRCSFNRWTHRLGLLPPQRMIPAENGSHVKATVKVPLDAYMMDFVFSERGDEHGGLYDNRNGMDYHVAV |
Full Sequence |
---|
Protein Sequence Length: 764 Download |
VWNGALQEVS KNKRLSTNIV ANAEFTRRSR KKPVEPKRKD AISKDISVSR KHASGVATDA 60 HDQNKAKNEQ DISDLDTDEV NQKSRGAQHV AITGGKKNSQ AAAASRFIKD IKRDVVDSRK 120 AGSGAGESER EKSQETQDNE KMPDAQDLRA AIKQKETEEL FKEHNLKKEK AEARRRDLEN 180 LAKENFSLHN KVFFYPIVAN AGQEIEIFLN RSITTLAIEP TVLIMGAFND WKWNSFITEL 240 QKSELNGDWW TCKLFIPKQT YKIDFVFFNG GKVYENNDRK DFSIAVEGGM NKQSFEDFLL 300 EEKRRELEKL GAEQAERERE AAERCRVEEE NAAKEADRAE AKKQVAERRE QTRQIMQMAV 360 KSVDGLWCFE PVDFKGGDRV KLYYNRSSRP LAFSSEVWIH GGYNNWVDAL TIVQKLSYDS 420 AENGDWWTVD VVVPEQAFVL DWVFADGPPG SAKVYDNNSY RDFHAIVPKS IPEDLFWVEE 480 EQRIYLKLLH ERREREEAAR KKVEKLALLK AERKEKTMEM FLQSQKHIFY TEPSKVEAGN 540 SVTVFYNPSN TVLNGKSEVW IRCSFNRWTH RLGLLPPQRM IPAENGSHVK ATVKVPLDAY 600 MMDFVFSERG DEHGGLYDNR NGMDYHVAVV GGILREPPMH IVHIAVEMAP IAKVGGLADV 660 VTSLSRAVQE LGHNAEIICP KYDCLDYSKV HNLQFRREFS WGGTKIKVWH GNVEGLSVYF 720 IEPGNGMFWA GCIYGRKDDG QRFGFFCNAA LEFLLQSGLH PVSI 780 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03423 | CBM_25 | 1.0e-30 | 377 | 468 | 92 | + Carbohydrate binding domain (family 25). | ||
pfam03423 | CBM_25 | 9.0e-32 | 539 | 629 | 91 | + Carbohydrate binding domain (family 25). | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 6.0e-33 | 640 | 761 | 130 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
PLN02939 | PLN02939 | 9.0e-38 | 639 | 761 | 130 | + transferase, transferring glycosyl groups | ||
PLN02316 | PLN02316 | 0 | 94 | 761 | 669 | + synthase/transferase |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF49176.1 | 0 | 127 | 761 | 206 | 837 | starch synthase III [Phaseolus vulgaris] |
EMBL | CAB40374.1 | 0 | 145 | 761 | 205 | 819 | Starch synthase isoform SS III [Vigna unguiculata] |
RefSeq | XP_002269011.1 | 0 | 165 | 761 | 219 | 814 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305571.1 | 0 | 148 | 761 | 80 | 691 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518476.1 | 0 | 166 | 761 | 147 | 732 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0.0004 | 639 | 761 | 1 | 126 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0.0006 | 639 | 761 | 1 | 126 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0.0006 | 639 | 761 | 1 | 126 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 0.0006 | 639 | 761 | 1 | 126 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 0.0006 | 639 | 761 | 1 | 126 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO778003 | 597 | 166 | 761 | 0 |
GR134497 | 226 | 536 | 761 | 0 |
DW001244 | 275 | 448 | 722 | 0 |
HO778003 | 388 | 90 | 467 | 0.00000000000002 |
GR134497 | 95 | 373 | 467 | 0.0002 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|