y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10437110g0020 |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 53037.1 Isoelectric Point: 4.6048 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 368 | 449 | 8e-24 |
WCVFNTNATDQSKLLDSITYACTYSDCTALGYGSSCNNLDLYGNASYAFNMYFQVMNQYEINCDFTGLAVITEQNASQGSCK | |||
GH17 | 25 | 346 | 0 |
LGVNWGTMALHPLSPDIVVQMLKDNGIKKVKLFDADGDTLRALANTDIEVMVAIPNNMLQHLSDSYKAAEKWVDKNVTRYNFSGGVNIKYVAVGNEPFLS AYNGSYLNNTFPALQNIHKALVKAGLADQIKVTVPLNADVYNSPSDNPVPSAGDFRADIHDLMKQIVTFLNDNEAPFTVNIYPFLSLYADENFPMDFAFF DGDSQPVVDGSVQYTNVFDANLDTLVWSLRKAGVPNMTIIVGEVGWPTDGDKHATSASAQRFNQGLLKHITSNQGTPMRPGNIEAYLFGLLDEDAKSVAP GNFERHWGIFGYDGQPKYELDF |
Full Sequence |
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Protein Sequence Length: 484 Download |
MMERAWFAGL IIFVLGSMAC AVEGLGVNWG TMALHPLSPD IVVQMLKDNG IKKVKLFDAD 60 GDTLRALANT DIEVMVAIPN NMLQHLSDSY KAAEKWVDKN VTRYNFSGGV NIKYVAVGNE 120 PFLSAYNGSY LNNTFPALQN IHKALVKAGL ADQIKVTVPL NADVYNSPSD NPVPSAGDFR 180 ADIHDLMKQI VTFLNDNEAP FTVNIYPFLS LYADENFPMD FAFFDGDSQP VVDGSVQYTN 240 VFDANLDTLV WSLRKAGVPN MTIIVGEVGW PTDGDKHATS ASAQRFNQGL LKHITSNQGT 300 PMRPGNIEAY LFGLLDEDAK SVAPGNFERH WGIFGYDGQP KYELDFSGPF QNGGLVPAKN 360 VNYLLPKWCV FNTNATDQSK LLDSITYACT YSDCTALGYG SSCNNLDLYG NASYAFNMYF 420 QVMNQYEINC DFTGLAVITE QNASQGSCKF PIGIAYAAAE RSIKIHANLA AVLLGVVTFI 480 LSFL 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 220 | 337 | 124 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-12 | 367 | 437 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-29 | 367 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-80 | 25 | 346 | 325 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 21 | 481 | 24 | 479 | beta-1,3-glucanase, acidic [Coffea arabica] |
GenBank | ABN09816.1 | 0 | 2 | 459 | 1 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | XP_002277003.1 | 0 | 1 | 454 | 1 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 2 | 474 | 1 | 473 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 2 | 455 | 1 | 454 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 25 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 25 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 25 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 25 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 25 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |