y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027390 |
Family | GH29 |
Protein Properties | Length: 499 Molecular Weight: 55934.2 Isoelectric Point: 6.679 |
Chromosome | Chromosome/Scaffold: 96 Start: 18585 End: 22899 |
Description | alpha-L-fucosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH29 | 52 | 349 | 0 |
QLKWQQREIIMFFHFGVNTFTGIERGNGHESPSVFNPTALNASQWVDAAAAAGVSLVILTAKHHDGFCLWPSKYTDHSVAASPWKGGRGDVVGELVDAAE KHGVDVGFYLSPWDRHDRRYGKEVEYNEYYLAQLQELLTKYGNIKEMWFDGFKGPNAPNMSYHFSDWFAMVKELQSPINIFSDAGLDVRWVGNEDGFAGE TCWSTINRTALTIGNRSIVDYLNKGDPEGTDWLPAECDVSIRPGWFWHKSDSPKKLSELLEIYYNSVGRNSLLLLGVPPNTTGLISETDFNRLREFRA |
Full Sequence |
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Protein Sequence Length: 499 Download |
MALNKPHFSS ILSLSSLWLY LLQILITAVA AASKYNVETP PLPVLPLPSF YQLKWQQREI 60 IMFFHFGVNT FTGIERGNGH ESPSVFNPTA LNASQWVDAA AAAGVSLVIL TAKHHDGFCL 120 WPSKYTDHSV AASPWKGGRG DVVGELVDAA EKHGVDVGFY LSPWDRHDRR YGKEVEYNEY 180 YLAQLQELLT KYGNIKEMWF DGFKGPNAPN MSYHFSDWFA MVKELQSPIN IFSDAGLDVR 240 WVGNEDGFAG ETCWSTINRT ALTIGNRSIV DYLNKGDPEG TDWLPAECDV SIRPGWFWHK 300 SDSPKKLSEL LEIYYNSVGR NSLLLLGVPP NTTGLISETD FNRLREFRAA IDTIFSTNLA 360 QHQGCSTQAS SERGGRSGAF GADNVLDNDH LWTYWAPSGR EQNREYWIEI KCGGDGLKKF 420 NVIRIQEAIG LGQRVKRHEV YVDGVRVAQG TTIGYKRLHR LEKGVVLSGE SVRVKVLESR 480 AVPLISSIGI YYDPYWHS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01120 | Alpha_L_fucos | 7.0e-31 | 86 | 347 | 277 | + Alpha-L-fucosidase. | ||
smart00812 | Alpha_L_fucos | 2.0e-32 | 86 | 347 | 279 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
COG3669 | COG3669 | 5.0e-58 | 51 | 491 | 456 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004560 | alpha-L-fucosidase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002270630.1 | 0 | 52 | 497 | 23 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270674.1 | 0 | 39 | 495 | 7 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318264.1 | 0 | 14 | 497 | 1 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322431.1 | 0 | 18 | 497 | 7 | 482 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510887.1 | 0 | 49 | 497 | 40 | 482 | alpha-l-fucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3eyp_B | 0 | 43 | 491 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
PDB | 3eyp_A | 0 | 43 | 491 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
PDB | 3ues_B | 0 | 48 | 486 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
PDB | 3ues_A | 0 | 48 | 486 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
PDB | 3mo4_B | 0 | 48 | 486 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |