y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014601 |
Family | GT48 |
Protein Properties | Length: 626 Molecular Weight: 71435.3 Isoelectric Point: 9.5569 |
Chromosome | Chromosome/Scaffold: 107 Start: 474234 End: 479562 |
Description | glucan synthase-like 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 199 | 483 | 0 |
PVGFYFNTMVVVLTVYSFLWGRLYLALSGIEGYAMETSKNNKAFGVILNQQFIVQMGIFTALPMVVENSLEHGFLPAVWDFLTMQLQLASVFYTFSLGTK AHFFGRTILHGGAKYRATGRGFVVQHKSFAENYRLYSRSHFVKAIELGVILIVYAAHSPMSMDAFVYIAMTLSSWFLVISWIMAPFVFNPSGFDWLKTVY DFEDFVNWIWFKGGVFTKAEQSWETWWYEEQDHLRNTGLWGKLLEIILDLRFFMFQYGVVYQLNITGGNTSISVYLLSWIFMVAV |
Full Sequence |
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Protein Sequence Length: 626 Download |
MASSFPGPPQ PTRGPYPPHA PMNHHQPEVY NIIPIHDLLT DHPSLRYPEV RAAASALRAV 60 GDLRKPPFIP WDPHMDLMDW LGLLFGFQGD SVRNQREHLV LHLANSQMRL QPPPVLPDAL 120 DPTVLRRFRR KLLANYTSWC SYIGRRSQLV FGGRTSGRWT ESDIHVRGQG CKWKRRAGIE 180 QRCLQTGTSD GFLPDAFLPV GFYFNTMVVV LTVYSFLWGR LYLALSGIEG YAMETSKNNK 240 AFGVILNQQF IVQMGIFTAL PMVVENSLEH GFLPAVWDFL TMQLQLASVF YTFSLGTKAH 300 FFGRTILHGG AKYRATGRGF VVQHKSFAEN YRLYSRSHFV KAIELGVILI VYAAHSPMSM 360 DAFVYIAMTL SSWFLVISWI MAPFVFNPSG FDWLKTVYDF EDFVNWIWFK GGVFTKAEQS 420 WETWWYEEQD HLRNTGLWGK LLEIILDLRF FMFQYGVVYQ LNITGGNTSI SVYLLSWIFM 480 VAVVGIYIVM VYFQERFAAK EHIKYRMAQL VVISLTILVL TLFLEFTAFT ILDLISSSLA 540 FIPTGWGFIS IALVLRPFLQ STVVWDTVVS LARVYDMLFG VIVLAPVALL SWLPGFQSMQ 600 TRILFNEAFS RGLQISRILS GKKTN* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 3.0e-88 | 190 | 503 | 354 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002458504.1 | 0 | 197 | 625 | 174 | 604 | hypothetical protein SORBIDRAFT_03g034880 [Sorghum bicolor] |
RefSeq | XP_002517916.1 | 7e-32 | 1 | 125 | 1 | 117 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002517916.1 | 0 | 200 | 625 | 882 | 1308 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002519064.1 | 0 | 8 | 157 | 10 | 155 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
RefSeq | XP_002519064.1 | 0 | 197 | 625 | 1161 | 1586 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Transmembrane Domains | ||||
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Start | End | |||
200 | 222 | |||
242 | 264 | |||
279 | 296 | |||
337 | 354 | |||
364 | 386 | |||
471 | 493 | |||
508 | 530 | |||
537 | 559 | |||
574 | 596 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX667461 | 280 | 224 | 503 | 0 |
EB432490 | 312 | 264 | 575 | 0 |
EC938097 | 291 | 327 | 617 | 0 |
GO861335 | 267 | 203 | 467 | 0 |
JG911511 | 275 | 235 | 509 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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