| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma07g03870.1 |
| Family | GT4 |
| Protein Properties | Length: 694 Molecular Weight: 78248.6 Isoelectric Point: 10.1415 |
| Chromosome | Chromosome/Scaffold: 07 Start: 2714396 End: 2718668 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 542 | 662 | 2.6e-22 |
| VGSKSNKVDYVKGLLSFLARHSNLSKSVLWTSATTRVASLYSAADVYAINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRAGN RVLAQNLRFLLENRLAREQMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 694 Download |
| MEDCNNKGEV HVHLTKQKQS SSRSGISLKA ALSGRSSPQH FPSFQRPYST LTPRRESKGD 60 AQCYGSNRLL LWLLLITLWA YLGFYVQSRW AHDDKEEEFS GFGSRQSDTT NSYVGQNQHL 120 DLIAKNISLS VNIELVENKT VDVALAKKEY GVLSQLKASS KKRNRRKRST HALRGTRRRK 180 HILESSDIEE QEPEIPLRND TYGFLVGPFG SIEDRILQWS PQRRYETCDK KGEFARLVWS 240 RRFVLIFHEL SMTGAPLSMM ELATELLSCG ASVSAVVLSR KGGLMQELAR RRIKVLDDKA 300 YLSFKIANKA DLVIAGSAVC TSWIEQYIEH FPAGANQVAW WIMENRREYF DRAKDVLQRV 360 NTLVFLSESQ SRQWQKWCVE EGIKLSSQLA LVPLSVNDEL AFVAGIPSTL KVPSFSAAKM 420 DERRKLLRDS IRREMGLNDN DILVMTLSSI NRGKGQLLLL ESARSMVEHG PLQQDDKKIP 480 ESSDDGEYLS TLARRHHIRN LLKDNSVALN NISSNFINRT REVLSQNNGT MAQSLKILIG 540 SVGSKSNKVD YVKGLLSFLA RHSNLSKSVL WTSATTRVAS LYSAADVYAI NSQGLGETFG 600 RVTIEAMAFG LPVLGTDAGG TQEIVEHNVT GLLHPIGRAG NRVLAQNLRF LLENRLAREQ 660 MGMEGRKKVQ RMFLKQHMYE KLVEVLVKCM RRI* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00072 | hydrog_prot | 5.0e-18 | 553 | 671 | 120 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
| cd03798 | GT1_wlbH_like | 2.0e-19 | 559 | 689 | 133 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 2.0e-22 | 564 | 684 | 121 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 2.0e-26 | 559 | 686 | 130 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71826.1 | 0 | 1 | 691 | 1 | 732 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36173.1 | 0 | 1 | 691 | 1 | 681 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284822.1 | 0 | 18 | 691 | 5 | 689 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298139.1 | 0 | 1 | 691 | 1 | 679 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528176.1 | 0 | 1 | 691 | 1 | 684 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.00000001 | 559 | 673 | 259 | 369 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.00000001 | 559 | 673 | 259 | 369 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.00000001 | 559 | 673 | 259 | 369 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.00000001 | 559 | 673 | 259 | 369 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.00000001 | 559 | 673 | 259 | 369 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
