| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g04290.1 |
| Family | AA2 |
| Protein Properties | Length: 381 Molecular Weight: 42225.8 Isoelectric Point: 6.5072 |
| Chromosome | Chromosome/Scaffold: 02 Start: 3477120 End: 3478663 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 106 | 363 | 2.94273e-44 |
| ALGNLLRLQFHDCFVNGCDASILLDYSPSGDTVEKSSMVNGLLLKGADMIDDIKLKLEEQCPQTVSCADTLAFTANEVMTMAGLPPRKPLGGRRDALVSL SSAADADNLPLPDWTMDQMVKLFTKKGFNIEEMVILLGAHSIGMAHCDLFIQRAYNFQNTGKPDPTLTVEAVEEFKKACPNVNTPKYRNPPVNFDATPTV LDNLFYMEMVERNRTFLITDSHLLTDQRTLPLVQQFAHDPSLFPRRFPEVMLKLGSLN | |||
| Full Sequence |
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| Protein Sequence Length: 381 Download |
| MKMTRIFLST LSLCLLLLQL NLSKAQPGSP QKLPFTFHSL FPFFGRPEDA NIPLKGPQDD 60 LQNVPQQAAD QKPQKLSPDF YIKTCPNAQK IVADALADIV KKNPGALGNL LRLQFHDCFV 120 NGCDASILLD YSPSGDTVEK SSMVNGLLLK GADMIDDIKL KLEEQCPQTV SCADTLAFTA 180 NEVMTMAGLP PRKPLGGRRD ALVSLSSAAD ADNLPLPDWT MDQMVKLFTK KGFNIEEMVI 240 LLGAHSIGMA HCDLFIQRAY NFQNTGKPDP TLTVEAVEEF KKACPNVNTP KYRNPPVNFD 300 ATPTVLDNLF YMEMVERNRT FLITDSHLLT DQRTLPLVQQ FAHDPSLFPR RFPEVMLKLG 360 SLNVLTGNEG EIRKICRSTN * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 3.0e-20 | 92 | 361 | 298 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-42 | 92 | 254 | 169 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 3.0e-56 | 80 | 380 | 307 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 7.0e-126 | 75 | 379 | 306 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM52320.1 | 0 | 75 | 380 | 14 | 319 | AC105363_9 Putative peroxidase [Oryza sativa Japonica Group] |
| GenBank | ACU17829.1 | 0 | 1 | 380 | 1 | 380 | unknown [Glycine max] |
| EMBL | CAH69312.1 | 0 | 75 | 380 | 26 | 332 | TPA: class III peroxidase 70 precursor [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002272663.1 | 0 | 53 | 380 | 31 | 360 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317837.1 | 0 | 75 | 380 | 27 | 328 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gw2_A | 0 | 75 | 380 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
| PDB | 2ylj_A | 0 | 75 | 380 | 1 | 305 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 1hch_A | 0 | 75 | 380 | 1 | 305 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 1atj_F | 0 | 75 | 380 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C1a |
| PDB | 1atj_E | 0 | 75 | 380 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C1a |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Signal Peptide | ||||
|---|---|---|---|---|
| Cleavage Site | ||||
| 25 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV265049 | 229 | 1 | 229 | 0 |
| EV265363 | 155 | 190 | 344 | 0 |
| EV267419 | 107 | 83 | 189 | 0 |
| EV267419 | 90 | 1 | 90 | 0 |
| FK001163 | 182 | 1 | 180 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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