y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K01479.1 |
Family | CBM43 |
Protein Properties | Length: 482 Molecular Weight: 52537.6 Isoelectric Point: 4.962 |
Chromosome | Chromosome/Scaffold: 11 Start: 17931263 End: 17934267 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 450 | 3.1e-24 |
WCTFNAGAKDVSKLVDNINFACTYADCTTLGYGSSCNSLDANGNASYAFNAYFQTQNQDPDSCNFQGLATVTTKNISQGSCN | |||
GH17 | 28 | 346 | 0 |
LGVNWGTLATHKLPPKTVVQMLKDNGIQKVKLFDADRKTMSALAGSGIEVMVAIPNDQLAVMGSYDRAQEWVKKNVTAYNFTGGVNVKYVAVGNEPFLKS YNGSFVNTTLPALQNIQKALNEAGLGDTVKATVPLNADVYESPEDNPLPSAGTFRSDISDVMTQIVKFMAENNAPFTVNIYPFLSLYGNNDFPFNYAFFD GATPIVDKGIEYTNVFDANFDTLVSALKAVGHGNMTIIIGEVGWPTEGDINANNGNAYRFYNGLFTKLGANRGTPLRPGYIEVYLFGLIDEDAKSVAPGN FERHWGLFRYDGQPKFLID |
Full Sequence |
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Protein Sequence Length: 482 Download |
MEKFDLFKWV LCGSIVLFGV GCGRVDGLGV NWGTLATHKL PPKTVVQMLK DNGIQKVKLF 60 DADRKTMSAL AGSGIEVMVA IPNDQLAVMG SYDRAQEWVK KNVTAYNFTG GVNVKYVAVG 120 NEPFLKSYNG SFVNTTLPAL QNIQKALNEA GLGDTVKATV PLNADVYESP EDNPLPSAGT 180 FRSDISDVMT QIVKFMAENN APFTVNIYPF LSLYGNNDFP FNYAFFDGAT PIVDKGIEYT 240 NVFDANFDTL VSALKAVGHG NMTIIIGEVG WPTEGDINAN NGNAYRFYNG LFTKLGANRG 300 TPLRPGYIEV YLFGLIDEDA KSVAPGNFER HWGLFRYDGQ PKFLIDLTGR GQNKLLIPAQ 360 NVEYQPQKWC TFNAGAKDVS KLVDNINFAC TYADCTTLGY GSSCNSLDAN GNASYAFNAY 420 FQTQNQDPDS CNFQGLATVT TKNISQGSCN FTIQLVASST SILRPLIVLT VISMAYTFLL 480 Q* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0008 | 254 | 338 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-16 | 368 | 438 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-31 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-79 | 28 | 346 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 25 | 480 | 25 | 479 | beta-1,3-glucanase, acidic [Coffea arabica] |
RefSeq | NP_176656.1 | 0 | 29 | 457 | 26 | 454 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 11 | 461 | 3 | 454 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 1 | 455 | 2 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525445.1 | 0 | 25 | 465 | 20 | 463 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 28 | 335 | 2 | 303 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_C | 0 | 28 | 335 | 2 | 303 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_B | 0 | 28 | 335 | 2 | 303 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_A | 0 | 28 | 335 | 2 | 303 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3em5_D | 0 | 28 | 335 | 2 | 303 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR410464 | 302 | 108 | 406 | 0 |
CA993350 | 302 | 155 | 456 | 0 |
HO797198 | 439 | 27 | 462 | 0 |
DV709068 | 296 | 161 | 455 | 0 |
DV708027 | 295 | 161 | 454 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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