y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02145.1 |
Family | CBM43 |
Protein Properties | Length: 492 Molecular Weight: 53330.3 Isoelectric Point: 4.71 |
Chromosome | Chromosome/Scaffold: 3 Start: 38799585 End: 38802932 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 451 | 3.8e-23 |
WCVMSQSASLQDSQVAPSVSYACANADCTSLGYGNSCSNLTAQGNISYAFNSYYQQHDQLDTACQFPNLSVITDNDPSVGDCK | |||
GH17 | 29 | 347 | 0 |
IGVNWGTQTTHPLPPATVVRMLKDNGFQKVKFFDANSSYLSALSKSGLQVMLGIPNDMLSSLASNVEAAENWVAQNLSTYVSSNGVDIRYIAVGNEPFLS TYNGTYLNTTLPALQNVQAAVVKAGLSTQVKVTIPLNADVLESSTNLPSDGDFRSDIRDLMLEIVKFLSDNGAPFTINIYPFISLYNDPSFPVEFAFFDS SSSPLNDKGTIYTNVLDANHDMLVWALQKNGYGNMSITVGEIGWPTDGDKNANAKSAQRFNQGFMTQYSAGKGTPLRPGQMDAYLFSLIDEDAKSIQPGN FERHWGLFSFDGQPKYQLN |
Full Sequence |
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Protein Sequence Length: 492 Download |
MGFFKFIAFS RLCVALLFLA ELVTSVGGIG VNWGTQTTHP LPPATVVRML KDNGFQKVKF 60 FDANSSYLSA LSKSGLQVML GIPNDMLSSL ASNVEAAENW VAQNLSTYVS SNGVDIRYIA 120 VGNEPFLSTY NGTYLNTTLP ALQNVQAAVV KAGLSTQVKV TIPLNADVLE SSTNLPSDGD 180 FRSDIRDLML EIVKFLSDNG APFTINIYPF ISLYNDPSFP VEFAFFDSSS SPLNDKGTIY 240 TNVLDANHDM LVWALQKNGY GNMSITVGEI GWPTDGDKNA NAKSAQRFNQ GFMTQYSAGK 300 GTPLRPGQMD AYLFSLIDED AKSIQPGNFE RHWGLFSFDG QPKYQLNLGS TSSNGLVAAR 360 DVKYLAKKWC VMSQSASLQD SQVAPSVSYA CANADCTSLG YGNSCSNLTA QGNISYAFNS 420 YYQQHDQLDT ACQFPNLSVI TDNDPSVGDC KFIIMIQSQS MSLVGSDGSR GRGIVPAILV 480 SSLLYMILWM P* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0003 | 68 | 339 | 275 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-11 | 368 | 434 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-26 | 368 | 452 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-75 | 29 | 347 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194843.1 | 0 | 9 | 488 | 7 | 484 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002324127.1 | 0 | 24 | 471 | 36 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330836.1 | 0 | 13 | 486 | 24 | 498 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528007.1 | 0 | 8 | 484 | 6 | 483 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530371.1 | 0 | 7 | 488 | 1 | 479 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 348 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 29 | 348 | 3 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |