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Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g46720.1 |
Family | CE8 |
Protein Properties | Length: 153 Molecular Weight: 16716.5 Isoelectric Point: 4.5729 |
Chromosome | Chromosome/Scaffold: 1 Start: 45292676 End: 45293343 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 32 | 140 | 2.9e-29 |
SPDEDTVFAVHNCTVAASPDLGAGTQTFLGRPWGAHARTVVMESYLGPLVDRAGWVGWPGAEPARGDTVYFGEYWNGGPGAGTDGRVGWAGFDEMDYDEA AQFSVDSFI |
Full Sequence |
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Protein Sequence Length: 153 Download |
MYSVLAQCKH LSHLRFWGHP RFQRRDSDII SSPDEDTVFA VHNCTVAASP DLGAGTQTFL 60 GRPWGAHART VVMESYLGPL VDRAGWVGWP GAEPARGDTV YFGEYWNGGP GAGTDGRVGW 120 AGFDEMDYDE AAQFSVDSFI LGDDWLRATS FP* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 2.0e-34 | 31 | 152 | 125 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 2.0e-34 | 33 | 152 | 121 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-37 | 31 | 143 | 117 | + Pectinesterase. | ||
PLN03043 | PLN03043 | 6.0e-38 | 33 | 152 | 123 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02416 | PLN02416 | 9.0e-41 | 23 | 152 | 133 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08348.1 | 1e-32 | 4 | 152 | 382 | 529 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
DDBJ | BAH56489.1 | 5e-34 | 23 | 152 | 413 | 538 | pectin methylesterase 1 [Prunus persica] |
RefSeq | NP_001057041.1 | 0 | 33 | 152 | 458 | 580 | Os06g0193200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002436630.1 | 0 | 3 | 152 | 452 | 601 | hypothetical protein SORBIDRAFT_10g006230 [Sorghum bicolor] |
RefSeq | XP_002516192.1 | 3e-34 | 33 | 152 | 418 | 538 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 1e-24 | 31 | 149 | 187 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 7e-24 | 33 | 152 | 193 | 314 | A Chain A, Pectin Methylesterase From Carrot |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK074962 | 123 | 33 | 152 | 0 |
FE611665 | 121 | 33 | 152 | 0 |
FE611664 | 121 | 33 | 152 | 0 |
FL836826 | 121 | 33 | 152 | 0 |
FL836825 | 121 | 33 | 152 | 0 |
Orthologous Group | |||||
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Species | ID | ||||
Panicum virgatum | Pavirv00030091m |
Sequence Alignments (This image is cropped. Click for full image.) |
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