y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra015803 |
Family | CE16 |
Protein Properties | Length: 347 Molecular Weight: 38176.6 Isoelectric Point: 5.4202 |
Chromosome | Chromosome/Scaffold: 07 Start: 20782383 End: 20784220 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 104 | 334 | 9.4e-25 |
FASGGAGYVPLTSQLSGGISLSQQLKLFEEYIEKLNEMVGEERTKFIMQNSLFMVICGSNDIANTYFALPSVQRQYNVDSFTTLMADKAQSFAQKLHEYG ARRIQVFGVPPLGCVPSQRTVAGGPTRSCVGRFNDATKLYNAKLSANLDSLSRNLRENTLIYIDIYGSLLDIILDPQQYGFQVVDRGCCGTGLIEVAVLC NNFTADICPNRHDHVFWDSFHPTEKTYKIMT |
Full Sequence |
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Protein Sequence Length: 347 Download |
MVLLSETITN ALVKLPANKT IPAIIVFGDS IVDAGNNDDI TTTLARCNYP PYGIDFDGGI 60 PTGRFSNGKV PTDFIAEELG IKPSVPAYRD PTLKPEDLLT GVTFASGGAG YVPLTSQLSG 120 GISLSQQLKL FEEYIEKLNE MVGEERTKFI MQNSLFMVIC GSNDIANTYF ALPSVQRQYN 180 VDSFTTLMAD KAQSFAQKLH EYGARRIQVF GVPPLGCVPS QRTVAGGPTR SCVGRFNDAT 240 KLYNAKLSAN LDSLSRNLRE NTLIYIDIYG SLLDIILDPQ QYGFQVVDRG CCGTGLIEVA 300 VLCNNFTADI CPNRHDHVFW DSFHPTEKTY KIMTAKYFER VLNKIF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01847 | Triacylglycerol_lipase_like | 1.0e-15 | 23 | 342 | 327 | + Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions. | ||
COG3240 | COG3240 | 6.0e-18 | 2 | 342 | 349 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
cd01846 | fatty_acyltransferase_like | 3.0e-32 | 24 | 339 | 316 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 9.0e-104 | 7 | 344 | 339 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 2.0e-137 | 22 | 338 | 317 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79814.1 | 0 | 1 | 313 | 29 | 342 | AC007396_7 T4O12.12 [Arabidopsis thaliana] |
GenBank | AAF79814.1 | 0 | 5 | 340 | 337 | 685 | AC007396_7 T4O12.12 [Arabidopsis thaliana] |
GenBank | ABK28470.1 | 0 | 1 | 340 | 25 | 364 | unknown [Arabidopsis thaliana] |
RefSeq | NP_001077829.1 | 0 | 1 | 340 | 25 | 364 | family II extracellular lipase 2 (EXL2) [Arabidopsis thaliana] |
RefSeq | NP_565121.1 | 0 | 1 | 340 | 25 | 377 | family II extracellular lipase 2 (EXL2) [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3kvn_A | 0.001 | 15 | 337 | 9 | 320 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 3kvn_X | 0.001 | 15 | 337 | 9 | 320 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO780479 | 347 | 1 | 347 | 0 |
EX759415 | 242 | 45 | 286 | 0 |
CX674893 | 314 | 22 | 335 | 0 |
DK491083 | 230 | 1 | 230 | 0 |
HO800204 | 335 | 9 | 343 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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