y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29675.m000398 |
Family | GT13 |
Protein Properties | Length: 389 Molecular Weight: 45108.5 Isoelectric Point: 6.3025 |
Chromosome | Chromosome/Scaffold: 29675 Start: 224422 End: 233779 |
Description | alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT13 | 22 | 231 | 0 |
IQMRLFATQSEYADRLASAIESENHCASQMRLLIDQISTQQGRIVAFEEERKRRDEECSQLKALVEDLERKGLKRVVDKIPVAAVVIMACNRADYLERTV KSILKYQTSVASKYPLFISQDGSHPEVRSKAMSYDQLIYMQHIDSEPVHPDRPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMEIAPDFFDYFE AAAAVLDKDK | |||
GT13 | 232 | 348 | 0 |
LKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNDVQVDWKSMDLSYLMEDKYPTFYANILKNAKPVYGNDAVLKAYNIEGDVRIQYKDQAD FERIASQFGIFEEWKVH |
Full Sequence |
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Protein Sequence Length: 389 Download |
MAKLACDFRC LLIPAAVAFF YIQMRLFATQ SEYADRLASA IESENHCASQ MRLLIDQIST 60 QQGRIVAFEE ERKRRDEECS QLKALVEDLE RKGLKRVVDK IPVAAVVIMA CNRADYLERT 120 VKSILKYQTS VASKYPLFIS QDGSHPEVRS KAMSYDQLIY MQHIDSEPVH PDRPGELIAY 180 YKIARHYKWA LDQLFYKHNF SRVIILEDDM EIAPDFFDYF EAAAAVLDKD KLKENHKGRQ 240 FIRPEVCRTY NFGEHGSSLG QFFKQYLEPI KLNDVQVDWK SMDLSYLMED KYPTFYANIL 300 KNAKPVYGND AVLKAYNIEG DVRIQYKDQA DFERIASQFG IFEEWKVHVM GVGDKLKIMV 360 VALQDDEEHH KRSRKDMGEE GRGGVEDKG 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00761 | Glyco_tranf_GTA_type | 0.005 | 106 | 220 | 115 | + Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. | ||
pfam13641 | Glyco_tranf_2_3 | 0.002 | 105 | 217 | 116 | + Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. | ||
pfam03071 | GNT-I | 6.0e-54 | 231 | 349 | 119 | + GNT-I family. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) EC:2.4.1.101 transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localised to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C-terminus. | ||
cd02514 | GT13_GLCNAC-TI | 3.0e-93 | 103 | 346 | 307 | + GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. | ||
pfam03071 | GNT-I | 1.0e-96 | 13 | 231 | 224 | + GNT-I family. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) EC:2.4.1.101 transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localised to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C-terminus. |
Gene Ontology | |
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GO Term | Description |
GO:0000139 | Golgi membrane |
GO:0003827 | alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
GO:0006487 | protein N-linked glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB53347.1 | 0 | 3 | 346 | 5 | 408 | alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Nicotiana tabacum] |
EMBL | CAC80697.1 | 0 | 3 | 346 | 5 | 408 | N-acetylglucosaminyltransferase I [Solanum tuberosum] |
EMBL | CAC80702.1 | 0 | 3 | 346 | 5 | 408 | N-acetylglucosaminyltransferase I [Nicotiana tabacum] |
EMBL | CBI29533.1 | 0 | 1 | 346 | 1 | 403 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002527145.1 | 0 | 1 | 389 | 1 | 389 | alpha-1,3-mannosyl-glycoprotein beta-1, 2-n-acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1foa_A | 4e-21 | 98 | 230 | 3 | 135 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
PDB | 1foa_A | 0.000000000001 | 234 | 353 | 199 | 318 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
PDB | 1fo9_A | 4e-21 | 98 | 230 | 3 | 135 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
PDB | 1fo9_A | 0.000000000001 | 234 | 353 | 199 | 318 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
PDB | 1fo8_A | 5e-21 | 101 | 230 | 1 | 130 | A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE633605 | 220 | 1 | 220 | 0 |
DT501093 | 231 | 1 | 231 | 0 |
DV148434 | 216 | 1 | 216 | 0 |
FG989519 | 231 | 1 | 229 | 0 |
FG161912 | 221 | 3 | 221 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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