y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27985.m000888 |
Family | AA2 |
Protein Properties | Length: 326 Molecular Weight: 35446.6 Isoelectric Point: 8.146 |
Chromosome | Chromosome/Scaffold: 27985 Start: 339939 End: 341447 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 53 | 309 | 0 |
VDRQVAARLLRLFFHDCFVQGCDGSILLENGETGERSARGNLGVGGFEVIQDAKTHLEGICPGMVSCADIVALAARDAVFLTNGPFFGVPTGRRDGRISK ISFAANLPEVDDSIEILKSKFQAKGLSDEDLVLLSGGHTIGTTACFFMPRRLYNFSGRGDSDPKINPKFLPQLKTQCPLNGDVNVRLPLDWSSDSIFDDH ILQNIRQGFAVIASDARLYDDRNTKQIIDSYVGSTGKGRRSFGADFAKAMVKLGNVD |
Full Sequence |
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Protein Sequence Length: 326 Download |
MLNYNLKTLV FSLLIIHTCF GVSKGNLRTG FYSQTCPLAE AIVLNVVKTA VSVDRQVAAR 60 LLRLFFHDCF VQGCDGSILL ENGETGERSA RGNLGVGGFE VIQDAKTHLE GICPGMVSCA 120 DIVALAARDA VFLTNGPFFG VPTGRRDGRI SKISFAANLP EVDDSIEILK SKFQAKGLSD 180 EDLVLLSGGH TIGTTACFFM PRRLYNFSGR GDSDPKINPK FLPQLKTQCP LNGDVNVRLP 240 LDWSSDSIFD DHILQNIRQG FAVIASDARL YDDRNTKQII DSYVGSTGKG RRSFGADFAK 300 AMVKLGNVDV KTGSQGEIRR VCNAVN 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02608 | PLN02608 | 2.0e-7 | 117 | 193 | 77 | + L-ascorbate peroxidase | ||
cd00314 | plant_peroxidase_like | 4.0e-20 | 54 | 307 | 276 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 6.0e-62 | 43 | 192 | 151 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-115 | 8 | 326 | 320 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 1.0e-144 | 26 | 325 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL93153.1 | 0 | 6 | 326 | 1 | 323 | AF485267_1 class III peroxidase [Gossypium hirsutum] |
EMBL | CAE54309.1 | 0 | 25 | 326 | 28 | 327 | peroxidase [Gossypium hirsutum] |
EMBL | CAN68097.1 | 0 | 9 | 326 | 21 | 345 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002278472.1 | 0 | 23 | 326 | 32 | 333 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526174.1 | 0 | 1 | 326 | 1 | 326 | Peroxidase 43 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 27 | 326 | 3 | 304 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
PDB | 1pa2_A | 0 | 27 | 326 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1qgj_B | 0 | 27 | 326 | 2 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 27 | 326 | 2 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1gwo_A | 0 | 27 | 326 | 3 | 306 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |