CAZyme Information: MGYG000004901_01061

Basic Information

• Lineage: Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio
• CAZyme ID: MGYG000004901_01061
• CAZy Family: GT9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
575		62762.45	6.0274

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004901	2471011	MAG	China	Asia

• Gene Location: Start: 807; End: 2534 Strand: +

Full Sequence      

METTGSAVDRSGTTLVINLTRFGDLLQCQPLIEDLHRQGQTVHLVCLDNFSSAQPLLRHV
ERTWPLPGARLMADMDKDWRIATALLLEFARAVRSEARPGCVVNLTTTLPARLLTGLLAG
GQADGQAEIRGFCLDAHGFGQNRGIWSTFLNSGAANRLSAPFNIADMFRMVGAPHAPAAA
AMQPRQGLADPPREAMDAADALLAGAPPETCGFVAMQLGASEARRQWPAHFFAEVGDRLW
RERKLCPVLLGSPAERPLAEAYAQAAQGPWMDAVGKTNLTQLAALLRRSKLLFTNDTGTM
HLAAGLGVPCLAIFLATAQPCDTGPYLPGCCCLEPALPCHPCPFGRPCPNDLACVTHISP
RSVESLALSWIDAGRWDAAPLDRVGREARVWLTEQDDKGFMTVRCLTEHAAEDRSLWLAQ
QRIFWRQILDELDGAARSAATEQQSADTSQPEENTPSASAHGTRHADESAGAFSAEFAQR
MATSLEQAAQLFEMLTQQGQLLGKSPKAGQLFLRNCERLQTVFDACPELRSLGAFWRELR
QERGDRLDDLLELTAQLGAHFVIWRHKFIDGTSFA

Enzyme Prediction     

No EC number prediction in MGYG000004901_01061.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT9	89	353	3.4e-42	0.9644444444444444

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd03789	GT9_LPS_heptosyltransferase	2.02e-45	15	367	3	275	lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG0859	RfaF	1.68e-22	15	352	5	317	ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01075	Glyco_transf_9	8.11e-21	213	353	107	246	Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
TIGR02195	heptsyl_trn_II	1.07e-16	225	363	189	325	lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
TIGR02193	heptsyl_trn_I	5.13e-12	218	326	186	291	lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTO40658.1	0.0	1	575	1	575
QCC86588.1	1.54e-286	3	575	12	581
AMD90830.1	2.41e-204	15	564	6	540
SPD35034.1	8.69e-176	15	567	29	573
VZH34087.1	4.36e-175	5	557	20	612

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3TOV_A	3.39e-08	214	326	188	298	Thecrystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008],3TOV_B The crystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000076	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004901_01061.