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CAZyme Information: MGYG000004899_03039

You are here: Home > Sequence: MGYG000004899_03039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900555635
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900555635
CAZyme ID MGYG000004899_03039
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 MGYG000004899_19|CGC1 53187.74 7.8451
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004899 5396709 MAG China Asia
Gene Location Start: 3553;  End: 4986  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004899_03039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 164 443 2.3e-31 0.7292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 0.006 216 376 237 392
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 0.010 219 410 100 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT34116.1 2.42e-306 1 477 1 485
QUU00182.1 2.31e-304 1 477 1 485
QEW35608.1 4.68e-302 1 477 1 477
QJR65187.1 7.74e-301 1 477 1 477
QJR73783.1 7.74e-301 1 477 1 477

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000765 0.700349 0.298006 0.000293 0.000301 0.000264

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004899_03039.