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CAZyme Information: MGYG000004797_03889

You are here: Home > Sequence: MGYG000004797_03889

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sartorii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sartorii
CAZyme ID MGYG000004797_03889
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
523 MGYG000004797_92|CGC1 59674.18 6.1942
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004797 5247182 MAG China Asia
Gene Location Start: 6004;  End: 7575  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 26 521 7.3e-197 0.9958677685950413

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 7.59e-143 24 389 1 366
O-Glycosyl hydrolase family 30.
COG5520 XynC 5.27e-11 149 474 124 404
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY38682.1 0.0 25 523 23 521
ABR38541.1 0.0 25 523 23 521
QEW34957.1 0.0 25 523 23 521
QJR57513.1 0.0 4 523 2 520
QJR62087.1 0.0 4 523 2 520

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 3.00e-92 27 523 8 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
7NCX_AAA 5.20e-07 20 465 7 393
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7O0E_A 2.65e-06 23 465 3 386
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
1NOF_A 3.06e-06 149 491 84 349
ChainA, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi]
6M5Z_A 6.16e-06 60 465 59 397
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 7.49e-14 39 421 36 381
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
G2Q1N4 9.25e-07 20 465 24 410
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000910 0.991497 0.006983 0.000229 0.000192 0.000190

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004797_03889.