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CAZyme Information: MGYG000004788_00204
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Companilactobacillus farciminis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Companilactobacillus; Companilactobacillus farciminis | |||||||||||
| CAZyme ID | MGYG000004788_00204 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 68196; End: 72788 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13402 | LT_TF-like | 1.03e-42 | 1320 | 1447 | 1 | 117 | lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| COG3953 | SLT | 5.23e-14 | 1321 | 1435 | 16 | 127 | SLT domain protein [Mobilome: prophages, transposons]. |
| COG5283 | COG5283 | 9.54e-13 | 544 | 1288 | 538 | 1176 | Phage-related tail protein [Mobilome: prophages, transposons]. |
| TIGR02675 | tape_meas_nterm | 3.45e-04 | 308 | 381 | 7 | 73 | tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length. |
| COG3941 | HI1514 | 0.006 | 179 | 538 | 33 | 348 | Phage tail tape-measure protein, controls tail length [Mobilome: prophages, transposons]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMT84198.1 | 0.0 | 1 | 1530 | 1 | 1530 |
| ATO46025.1 | 0.0 | 1 | 1530 | 1 | 1530 |
| APX72088.1 | 0.0 | 193 | 1530 | 197 | 1499 |
| QXL48446.1 | 6.15e-132 | 193 | 1493 | 262 | 1772 |
| AYE38402.1 | 9.98e-124 | 189 | 1530 | 179 | 1515 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26812 | 1.80e-08 | 190 | 419 | 138 | 365 | Tape measure protein (Fragment) OS=Lactococcus phage F4-1 OX=12387 PE=3 SV=1 |
| P45931 | 4.11e-07 | 1326 | 1373 | 1370 | 1417 | Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2 |
| P54334 | 4.52e-06 | 1330 | 1375 | 1122 | 1167 | Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000050 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |