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CAZyme Information: MGYG000004781_02815
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS680; | |||||||||||
| CAZyme ID | MGYG000004781_02815 | |||||||||||
| CAZy Family | CBM51 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 6008; End: 17284 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM51 | 1852 | 2000 | 1.7e-23 | 0.9776119402985075 |
| CBM32 | 2690 | 2810 | 3.5e-18 | 0.8870967741935484 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 1.69e-28 | 1849 | 2001 | 1 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| pfam00754 | F5_F8_type_C | 1.69e-19 | 2690 | 2813 | 4 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| smart00776 | NPCBM | 2.19e-19 | 1850 | 2001 | 4 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam00754 | F5_F8_type_C | 7.52e-11 | 1445 | 1560 | 10 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam09479 | Flg_new | 1.39e-07 | 1126 | 1191 | 1 | 65 | Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMN35280.1 | 1.15e-212 | 1851 | 2823 | 49 | 995 |
| AQW23377.1 | 9.90e-212 | 1851 | 2823 | 49 | 995 |
| ATD49073.1 | 1.15e-211 | 1851 | 2823 | 54 | 1000 |
| SQG16429.1 | 1.44e-142 | 1792 | 2816 | 82 | 1099 |
| VED84782.1 | 1.44e-142 | 1792 | 2816 | 82 | 1099 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JND_A | 1.42e-15 | 1435 | 1634 | 70 | 269 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JNB_A | 2.50e-15 | 1435 | 1634 | 70 | 269 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JFS_A | 4.26e-15 | 1435 | 1634 | 52 | 251 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 2J7M_A | 7.48e-11 | 2688 | 2804 | 13 | 131 | Characterizationof a Family 32 CBM [Clostridium perfringens] |
| 2J1A_A | 7.67e-11 | 2688 | 2804 | 14 | 132 | Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2MGH6 | 7.15e-11 | 2686 | 2813 | 1497 | 1624 | Endo-alpha-N-acetylgalactosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=SP_0368 PE=1 SV=1 |
| Q0TR53 | 1.75e-08 | 2661 | 2804 | 605 | 749 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1 |
| Q8XL08 | 1.75e-08 | 2661 | 2804 | 605 | 749 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1 |
| P0DTR4 | 4.04e-07 | 2680 | 2814 | 509 | 644 | A type blood N-acetyl-alpha-D-galactosamine deacetylase OS=Flavonifractor plautii OX=292800 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.017032 | 0.969199 | 0.012799 | 0.000406 | 0.000276 | 0.000258 |