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CAZyme Information: MGYG000004723_00089
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acutalibacter sp900548545 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter sp900548545 | |||||||||||
| CAZyme ID | MGYG000004723_00089 | |||||||||||
| CAZy Family | GH39 | |||||||||||
| CAZyme Description | HTH-type transcriptional activator RhaR | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 106638; End: 108983 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH39 | 314 | 731 | 3.5e-37 | 0.9443155452436195 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3664 | XynB | 6.73e-28 | 320 | 778 | 4 | 422 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
| COG2207 | AraC | 2.70e-27 | 135 | 258 | 1 | 124 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
| smart00342 | HTH_ARAC | 2.91e-26 | 170 | 253 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
| pfam01229 | Glyco_hydro_39 | 1.78e-25 | 312 | 775 | 25 | 482 | Glycosyl hydrolases family 39. |
| pfam12833 | HTH_18 | 6.33e-22 | 176 | 254 | 1 | 80 | Helix-turn-helix domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMV13792.1 | 2.40e-107 | 25 | 778 | 27 | 792 |
| QQQ92191.1 | 1.50e-91 | 23 | 778 | 23 | 794 |
| QJU15301.1 | 1.50e-91 | 23 | 778 | 23 | 794 |
| ASU27451.1 | 1.63e-91 | 23 | 778 | 27 | 798 |
| ANU74646.2 | 1.63e-91 | 23 | 778 | 27 | 798 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4M29_A | 5.43e-24 | 313 | 778 | 35 | 494 | Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15] |
| 4EKJ_A | 9.66e-24 | 313 | 778 | 35 | 494 | ChainA, Beta-xylosidase [Caulobacter vibrioides] |
| 6UQJ_A | 5.75e-23 | 309 | 780 | 33 | 503 | Crystalstructure of the GH39 enzyme from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306] |
| 2BS9_A | 1.61e-18 | 324 | 780 | 37 | 480 | Nativecrystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_B Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_C Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_D Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_E Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_F Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_G Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus],2BS9_H Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
| 1W91_A | 3.77e-18 | 324 | 780 | 37 | 480 | crystalstructure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_B crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_C crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_D crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_E crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_F crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_G crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct],1W91_H crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine [synthetic construct] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P36906 | 1.48e-16 | 331 | 773 | 44 | 472 | Beta-xylosidase OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynB PE=1 SV=1 |
| Q936F1 | 3.21e-15 | 5 | 778 | 2 | 737 | Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2 |
| Q6GD21 | 9.66e-15 | 5 | 778 | 2 | 737 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
| Q8NYT6 | 9.66e-15 | 5 | 778 | 2 | 737 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
| Q7A882 | 6.65e-14 | 5 | 778 | 2 | 737 | Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000072 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |