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CAZyme Information: MGYG000004721_00916

You are here: Home > Sequence: MGYG000004721_00916

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004721_00916
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1047 MGYG000004721_15|CGC2 118108.83 8.4415
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004721 2389811 MAG Denmark Europe
Gene Location Start: 46944;  End: 50087  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004721_00916.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 41 688 1.3e-78 0.7985436893203883
GH28 704 1030 2.7e-68 0.92

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.90e-62 663 970 64 405
Polygalacturonase [Carbohydrate transport and metabolism].
pfam17132 Glyco_hydro_106 4.45e-26 154 624 378 848
alpha-L-rhamnosidase.
pfam00295 Glyco_hydro_28 6.40e-26 753 1000 34 276
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 2.00e-20 769 963 109 291
Probable polygalacturonase At3g15720
PLN03010 PLN03010 6.59e-20 674 998 45 340
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABR37905.1 0.0 5 1047 6 1079
QQY39769.1 0.0 5 1047 6 1079
QQY43070.1 0.0 5 1047 6 1079
QUT56825.1 0.0 5 1047 6 1079
QJR73844.1 0.0 5 1047 6 1079

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 2.32e-41 688 1025 56 425
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.54e-35 685 973 36 362
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 1.43e-16 674 999 149 534
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MXN_A 6.87e-14 674 868 20 213
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.05e-32 687 1025 73 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 4.80e-21 637 1046 123 575
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q9LW07 2.50e-19 755 963 99 291
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P27644 1.13e-18 802 970 23 193
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
O22818 2.18e-16 661 1000 28 343
Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000244 0.999136 0.000153 0.000163 0.000152 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004721_00916.