You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004692_01113
You are here: Home > Sequence: MGYG000004692_01113
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella aerofaciens_H | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella aerofaciens_H | |||||||||||
| CAZyme ID | MGYG000004692_01113 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 25019; End: 26647 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK08581 | PRK08581 | 1.81e-22 | 277 | 367 | 503 | 592 | amidase domain-containing protein. |
| COG3942 | COG3942 | 2.07e-22 | 243 | 374 | 28 | 156 | Surface antigen [Cell wall/membrane/envelope biogenesis]. |
| pfam05257 | CHAP | 5.59e-17 | 278 | 367 | 1 | 82 | CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine. |
| cd06565 | GH20_GcnA-like | 0.005 | 282 | 352 | 229 | 284 | Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QTL79460.1 | 2.99e-313 | 1 | 542 | 1 | 544 |
| BAR04657.1 | 4.18e-165 | 1 | 542 | 1 | 543 |
| BAR05911.1 | 2.50e-149 | 297 | 520 | 1 | 224 |
| BAR05790.1 | 1.85e-83 | 232 | 542 | 257 | 560 |
| QTL82534.1 | 5.28e-52 | 271 | 542 | 234 | 494 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2LRJ_A | 1.28e-13 | 282 | 399 | 11 | 112 | ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL] |
| 5T1Q_A | 5.96e-13 | 258 | 373 | 224 | 341 | ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325] |
| 2K3A_A | 4.20e-12 | 282 | 398 | 52 | 154 | ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] |
| 4CGK_A | 2.94e-10 | 270 | 376 | 276 | 370 | Crystalstructure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39],4CGK_B Crystal structure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2G222 | 7.38e-12 | 258 | 373 | 484 | 601 | N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1 |
| Q2G0D4 | 6.08e-11 | 282 | 399 | 161 | 265 | Probable autolysin SsaALP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00671 PE=1 SV=1 |
| Q2G278 | 3.13e-10 | 282 | 399 | 178 | 279 | Probable autolysin LDP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00773 PE=1 SV=1 |
| Q6GDN3 | 5.80e-10 | 275 | 399 | 147 | 255 | Staphylococcal secretory antigen ssaA1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=ssaA1 PE=3 SV=1 |
| Q2FV55 | 7.80e-10 | 275 | 399 | 147 | 255 | Staphylococcal secretory antigen SsaA OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=ssaA PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000045 | 0.000005 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
