CAZyme Information: MGYG000004621_01370

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella
• CAZyme ID: MGYG000004621_01370
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
872	MGYG000004621_53|CGC1	98045.17	9.2928

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004621	2838817	MAG	France	Europe

• Gene Location: Start: 9643; End: 12261 Strand: -

Full Sequence      

MKILRTILLTALSVTALSSAGQSRIIIKAKTLMHEMRATPSPLDGDTVADRKVSLQWPME
ASLNDADSPLDGYAPRVRVDKSRIAYKVRFSRSPIPADGKGKGITVIDTRWPMYNPDNDF
QPGTWYWQYGYVDGNAVRWSAQLRFVVKANPNKFCPPALSALLKNLPQGHPRILTTADSW
SSIIAGSMGKEEREWYISAANKLLTTPMKSVDDITTSALKNMKNEQQVKAYLTRESRRVI
DKEEGNCNALAGAYVLTRDRRYADEALHRILQIVNWDKSDKVKGDFNDATFLSLATTAYD
TFYNILSDDDRATLLNVIRDKAGKMYAQYNNHLENHIADNHVWQMTLRILTMAAFATYGD
LPEATTWTDYCYNVWLSRMPGLNDDGAWHNGDSYFTVNTRTLIEVPLLYTRLSGFNFFSD
PWYGRDVLYAIYQQPPFSKSGGNGSAHLEKLVPNAGRISYLDALARILGNTYAADFVRMT
LDKSPGFLRKVFLTKAADLTWFRICCDKPLPNGPGLAALPAGHVFPNSGLASFMTDLSHP
RRNAWWSFRSSPYGSTSHALANQNAFNTFYGGQSLFYSSGHHTSFIDHHALYCERASRAH
NTILANGMGQRIGTEGYGWIPRWYVGEKIGYVLGDASNAYGPVISPLWKERAKLSEVEIS
PKTGWDTKNHVKTYRRHMVNMGKTGLLFIYDELEADSAITWTYLLHSVLKPLSMDSGKDF
VHVEATNDFGASDAYLFAPTKLTTDVTDQFFYPAVNWLKADDKGVFKPNANHWHFSAKSP
GSRRYHFATIIDTHALKDKARVPVTINKDKNGRTISAGTWKVSFRLSPEGKGMFHLIDTA
TGAEILYQGEETIIKENEKTVRLTDKTPKLEI

Enzyme Prediction     

No EC number prediction in MGYG000004621_01370.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	539	693	6.5e-81	0.9807692307692307

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	31	508	2	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	0.001	517	706	1	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94210.1	0.0	12	872	12	867
QRM98744.1	0.0	12	872	12	867
QUT78348.1	0.0	12	872	12	867
QDM11437.1	0.0	12	872	12	867
QUR44694.1	0.0	12	872	12	867

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.87e-262	16	872	16	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	2.11e-259	16	872	16	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	3.31e-34	86	802	53	745	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	5.54e-33	86	802	53	745	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.013766	0.913919	0.071328	0.000379	0.000291	0.000291

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004621_01370.