logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004602_00428

You are here: Home > Sequence: MGYG000004602_00428

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900551555
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900551555
CAZyme ID MGYG000004602_00428
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000004602_4|CGC1 79142.11 4.9375
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004602 2016081 MAG France Europe
Gene Location Start: 51695;  End: 53860  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004602_00428.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 328 1e-77 0.9791666666666666
CE19 453 698 1.4e-25 0.608433734939759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 6.03e-63 6 314 81 388
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 7.91e-50 16 311 10 275
Pectinesterase.
PLN02708 PLN02708 2.14e-42 10 336 245 550
Probable pectinesterase/pectinesterase inhibitor
PLN02773 PLN02773 2.59e-41 8 314 7 282
pectinesterase
PLN02432 PLN02432 2.67e-40 1 334 7 291
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 1 718 1 718
ATP54718.1 0.0 1 721 1 721
QUC03567.1 0.0 8 713 7 707
QRP39805.1 2.77e-95 8 336 18 349
ASN95501.1 2.77e-95 8 336 18 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 4.30e-28 10 310 7 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 1.34e-24 33 283 55 305
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 2.68e-24 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 4.91e-24 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 4.29e-23 16 331 17 305
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 2.03e-32 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q8L7Q7 1.20e-30 18 324 301 593
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2
Q9LVQ0 1.81e-29 8 314 7 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O81320 2.86e-29 10 328 167 453
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
Q9LXD9 3.51e-29 18 314 251 527
Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana OX=3702 GN=PME51 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000036 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004602_00428.