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CAZyme Information: MGYG000004587_00275
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA1409 sp900553675 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA1409; UBA1409 sp900553675 | |||||||||||
| CAZyme ID | MGYG000004587_00275 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 66892; End: 68034 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 38 | 375 | 1e-96 | 0.9933993399339934 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 1.98e-104 | 39 | 375 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 1.30e-97 | 83 | 373 | 2 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.58e-83 | 50 | 380 | 39 | 345 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCZ47833.1 | 1.46e-86 | 32 | 378 | 51 | 403 |
| AEE95681.1 | 1.62e-85 | 4 | 373 | 3 | 375 |
| AAQ99279.1 | 1.04e-84 | 35 | 375 | 7 | 333 |
| ADU28829.1 | 2.94e-83 | 33 | 373 | 6 | 332 |
| APO44853.1 | 4.33e-83 | 33 | 375 | 208 | 552 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4W8L_A | 2.85e-86 | 37 | 375 | 3 | 343 | Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis] |
| 3W24_A | 1.26e-80 | 34 | 378 | 4 | 328 | Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485 [Thermoanaerobacterium saccharolyticum JW/SL-YS485] |
| 3W27_A | 1.00e-79 | 34 | 378 | 4 | 328 | Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3W28_A The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3W29_A The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotetraose [Thermoanaerobacterium saccharolyticum JW/SL-YS485] |
| 3W25_A | 1.00e-79 | 34 | 378 | 4 | 328 | Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3W26_A The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylotriose [Thermoanaerobacterium saccharolyticum JW/SL-YS485] |
| 6FHE_A | 1.23e-78 | 32 | 374 | 6 | 339 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O69230 | 1.16e-79 | 31 | 375 | 363 | 709 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
| O69231 | 2.44e-76 | 35 | 374 | 4 | 329 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| P07528 | 8.86e-75 | 24 | 375 | 42 | 396 | Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1 |
| P36917 | 1.03e-74 | 24 | 378 | 342 | 677 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
| P38535 | 3.03e-73 | 24 | 378 | 194 | 529 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000040 | 0.000000 | 0.000000 | 0.000000 |
