dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004571_00600

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Species

UBA6382 sp900557555

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; UBA6382; UBA6382 sp900557555

CAZyme ID

MGYG000004571_00600

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
500	MGYG000004571_12\|CGC1	55993.77	6.1179

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004571	2289596	MAG	France	Europe

Gene Location

Start: 42080; End: 43582 Strand: +

No EC number prediction in MGYG000004571_00600.

Family	Start	End	Evalue	family coverage
GH29	42	354	3.5e-57	0.8670520231213873

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3669	AfuC	5.14e-35	37	500	6	430	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
smart00812	Alpha_L_fucos	3.19e-22	30	379	9	365	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
pfam01120	Alpha_L_fucos	8.05e-22	52	353	44	329	Alpha-L-fucosidase.
pfam00754	F5_F8_type_C	8.03e-06	365	488	1	115	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUB82373.1	1.83e-231	8	500	13	509
AUI56213.1	3.67e-231	8	500	13	509
QUB79996.1	1.41e-228	8	500	13	509
QUB66849.1	6.01e-225	8	500	13	508
QUB69927.1	3.45e-224	8	500	13	508

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5K9H_A	4.01e-76	36	500	34	463	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]
4ZRX_A	2.99e-64	40	500	31	458	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
3UES_A	3.09e-63	41	496	19	472	Crystalstructure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis complexed with deoxyfuconojirimycin [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088],3UES_B Crystal structure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis complexed with deoxyfuconojirimycin [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]
6TR3_A	8.13e-63	40	500	27	503	Ruminococcusgnavus GH29 fucosidase E1_10125 in complex with fucose [[Ruminococcus] gnavus E1]
6TR4_A	1.16e-61	40	500	27	503	Ruminococcusgnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1],6TR4_B Ruminococcus gnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	6.04e-63	34	500	31	477	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	1.16e-60	30	500	29	476	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000212	0.999175	0.000157	0.000154	0.000135	0.000129

There is no transmembrane helices in MGYG000004571_00600.