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CAZyme Information: MGYG000004561_00734

You are here: Home > Sequence: MGYG000004561_00734

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002480935
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002480935
CAZyme ID MGYG000004561_00734
CAZy Family PL22
CAZyme Description Oligogalacturonate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
399 MGYG000004561_9|CGC1 46576.68 7.6629
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004561 3001921 MAG France Europe
Gene Location Start: 70926;  End: 72125  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004561_00734.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL22 193 397 2.6e-79 0.9898477157360406

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14583 Pectate_lyase22 1.18e-11 29 399 4 382
Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYD49352.1 1.07e-148 28 399 16 404
AHF15117.1 1.40e-146 3 399 2 407
QEC73640.1 8.91e-145 1 399 1 417
QEL04116.1 4.26e-144 24 399 21 415
QEC55257.1 3.74e-143 24 399 24 412

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000425 0.997288 0.001658 0.000220 0.000207 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004561_00734.