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CAZyme Information: MGYG000004501_00728

You are here: Home > Sequence: MGYG000004501_00728

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900760665
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900760665
CAZyme ID MGYG000004501_00728
CAZy Family GH110
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
773 84634.83 8.0312
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004501 2469413 MAG Israel Asia
Gene Location Start: 30849;  End: 33170  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004501_00728.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 199 739 3.6e-53 0.9963503649635036

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 1.74e-12 570 740 5 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 1.81e-07 569 709 50 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 4.28e-05 628 771 6 112
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048 NosD 0.002 569 740 23 148
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44429.1 4.60e-194 23 772 18 770
AVM44109.1 6.58e-189 10 772 42 807
AVM44539.1 5.76e-131 69 770 65 763
AVM46987.1 2.09e-111 75 773 40 748
QGQ98096.1 2.65e-101 179 770 1000 1586

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 4.20e-18 199 739 28 596
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.69e-17 199 739 28 596
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1KD83 1.11e-26 199 688 33 529
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.209856 0.789014 0.000353 0.000261 0.000239 0.000251

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004501_00728.