CAZyme Information: MGYG000004490_01828

Basic Information

• Species: Muribaculum sp003150235
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Muribaculum; Muribaculum sp003150235
• CAZyme ID: MGYG000004490_01828
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
988	MGYG000004490_19|CGC2	107400.89	8.8428

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004490	3323418	MAG	Israel	Asia

• Gene Location: Start: 69155; End: 72121 Strand: -

Full Sequence      

MKKTFSLIFMALYLGAMLISAKAEPSIKQLAATPQCDRWVDSVYSGMTMKQRVAQLFVPK
VNPANVAAAKQTIHTYVKTLGVGGLLFSKGTIDQYAQLTDYAQSIAAIPLVMTLDGEWGP
AMRVTGTTRFPYNMSLGAIDDERLLYEYGKEVARECKLLGINVNFAPVLDVNSNPANPVI
GYRSFGEDPERVARLGTAYSRGLEAGGIMAVGKHFPGHGDTNKDSHKELPVVSHSRQQLH
DIDLLPFRRFIDAGMSGIMVGHLNVPAIDRSGTPTSLSHKATTGLLKEEMGFDGLIWTDG
LAMKGASTGKENNCVSALKAGVDILLESAAPRTDIAAVVAAVENGTIPASVIESRCKKVL
AYKYALGLADRYKPVSDASLKKQLDSPEADAVNRRLTAAMITCLENKEALLPIGDTYDKH
IAVVNIGEGADNTFSHYCSKYADIKRYSASTALTATQLKAIKSCDMVIAGIYNDKAASIE
ALRQLEGCRNLVTVFFLNPYKLSKFAPLKSGAVLLTGENTALAQEYAAQGVFGGIRVNGS
LPVNVKGIAPLGRCVGLMKTRLGYSSPAVKGLDPTLDYRVDSLVKTGLQTGAFPGCQVLI
AKSGDIILDKQYGYTDNTKTHKVNDSTLYDLASVSKIAGTLPGLMLAYDEGLYKLDDPAY
KYIPGLQQRGKDDITPRQLLLHESGLPAAINLSKFMMDTTSYTGKLIAYRMRGDNTIKIA
KGVYANRNARLRRDITSKTRTEDFDKQVADGLYVSDATVDSIMEQIYAVDTRDSKNYLYS
DLNFALLMDMEQNVSGQPHDMFVENGIFRPLGATHTLYRPLSRFSAANIASTEHDKFMRK
QALKGYVHDELAAFSGGVQGNAGLFSTAGDLAKLCQMWLNGGSYAGRQIMSPATVNTFTG
TKSDKSRRKLGFDGPDTDNPDKTPTAKDADPSTFGHIGFTGTCIWVDPKNELIYIFLSNR
VNPTRDNSAFSRLNIRPAIMDAVYRATK

Enzyme Prediction     

No EC number prediction in MGYG000004490_01828.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	103	326	6.2e-64	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	7.03e-83	48	360	1	314	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	1.64e-81	47	433	1	367	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK03642	PRK03642	1.28e-52	565	988	28	432	putative periplasmic esterase; Provisional
PRK05337	PRK05337	2.51e-48	82	326	26	278	beta-hexosaminidase; Provisional
pfam00144	Beta-lactamase	2.83e-41	580	966	1	314	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCD35538.1	0.0	7	988	9	990
ASB36988.1	0.0	14	983	11	986
ANU62524.1	0.0	14	983	11	986
QQR10146.1	0.0	14	983	11	986
AHF12964.1	3.82e-298	23	986	22	986

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	1.46e-63	1	472	1	515	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	7.81e-63	41	472	10	489	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	1.43e-62	41	472	40	519	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A	4.47e-62	43	542	5	528	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3SQL_A	4.12e-49	68	359	45	342	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	7.99e-63	1	472	1	515	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	2.57e-45	83	545	66	596	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
P77619	7.22e-42	565	988	28	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
Q8XBJ0	4.42e-41	565	988	28	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1
B5RCU8	1.76e-38	562	988	25	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000234	0.999149	0.000170	0.000151	0.000141	0.000134

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004490_01828.