You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004479_02173
You are here: Home > Sequence: MGYG000004479_02173
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola mediterraneensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola mediterraneensis | |||||||||||
| CAZyme ID | MGYG000004479_02173 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 25902; End: 28688 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 24 | 708 | 4.9e-75 | 0.6981382978723404 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 1.31e-33 | 22 | 464 | 11 | 442 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 7.41e-26 | 25 | 430 | 14 | 417 | beta-D-glucuronidase; Provisional |
| PRK10340 | ebgA | 3.39e-15 | 95 | 453 | 113 | 471 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| pfam02837 | Glyco_hydro_2_N | 2.97e-13 | 26 | 163 | 4 | 135 | Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. |
| pfam00703 | Glyco_hydro_2 | 1.16e-07 | 201 | 307 | 1 | 106 | Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QKH84659.1 | 0.0 | 1 | 922 | 1 | 919 |
| QRM70214.1 | 0.0 | 1 | 914 | 1 | 913 |
| AUI45834.1 | 0.0 | 1 | 922 | 1 | 919 |
| QCQ54210.1 | 0.0 | 1 | 914 | 1 | 913 |
| QCQ32061.1 | 0.0 | 1 | 922 | 1 | 919 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5T9A_A | 1.33e-19 | 91 | 487 | 85 | 495 | Crystalstructure of BuGH2Cwt [Bacteroides uniformis],5T9A_B Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_C Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_D Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9G_A Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_B Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_C Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_D Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis] |
| 6LEM_B | 3.37e-19 | 26 | 528 | 13 | 518 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 6LEJ_B | 3.39e-19 | 26 | 528 | 15 | 520 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 6LEG_A | 3.40e-19 | 26 | 528 | 16 | 521 | ChainA, Beta-D-glucuronidase [Escherichia coli],6LEG_B Chain B, Beta-D-glucuronidase [Escherichia coli],6LEG_C Chain C, Beta-D-glucuronidase [Escherichia coli],6LEG_D Chain D, Beta-D-glucuronidase [Escherichia coli],6LEL_A Chain A, Beta-D-glucuronidase [Escherichia coli],6LEL_B Chain B, Beta-D-glucuronidase [Escherichia coli] |
| 3K46_A | 3.42e-19 | 26 | 528 | 17 | 522 | Crystalstructure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K46_B Crystal structure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K4D_A Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],3K4D_B Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],6LEM_A Chain A, Beta-D-glucuronidase [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P77989 | 1.21e-19 | 82 | 427 | 47 | 384 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| P05804 | 1.86e-18 | 26 | 528 | 15 | 520 | Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2 |
| Q56307 | 1.57e-16 | 20 | 454 | 36 | 465 | Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2 |
| Q9K9C6 | 8.09e-14 | 95 | 453 | 124 | 482 | Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1 |
| Q02603 | 9.83e-14 | 95 | 453 | 132 | 488 | Beta-galactosidase large subunit OS=Leuconostoc lactis OX=1246 GN=lacL PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002166 | 0.845500 | 0.151555 | 0.000276 | 0.000227 | 0.000230 |