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CAZyme Information: MGYG000004468_00351

You are here: Home > Sequence: MGYG000004468_00351

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900539755
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900539755
CAZyme ID MGYG000004468_00351
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
964 MGYG000004468_1|CGC6 109157.54 6.5313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004468 2418771 MAG Israel Asia
Gene Location Start: 428679;  End: 431573  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004468_00351.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 47 964 1.5e-174 0.9927184466019418

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 6.69e-43 225 770 369 870
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 1.87e-04 544 642 2 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam08532 Glyco_hydro_42M 2.50e-04 541 642 1 89
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG53799.1 0.0 44 964 1 920
BBL12421.1 0.0 44 964 36 947
BBL09627.1 0.0 44 964 36 947
BBL01754.1 0.0 44 964 36 947
QNL48206.1 1.09e-281 8 961 12 942

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.09e-32 251 963 457 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 9.84e-50 42 858 28 805
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000862 0.998194 0.000329 0.000207 0.000191 0.000185

TMHMM  Annotations      download full data without filtering help

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