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CAZyme Information: MGYG000004393_01407

You are here: Home > Sequence: MGYG000004393_01407

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-460;
CAZyme ID MGYG000004393_01407
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
393 MGYG000004393_22|CGC1 44512.3 7.6539
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004393 1406666 MAG Israel Asia
Gene Location Start: 6004;  End: 7185  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004393_01407.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 3.42e-30 276 388 3 105
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 5.48e-23 253 384 67 195
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
NF033742 NlpC_p60_RipB 5.17e-18 261 392 77 206
NlpC/P60 family peptidoglycan endopeptidase RipB.
PRK10838 spr 5.31e-18 294 393 93 188
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.
NF033741 NlpC_p60_RipA 3.05e-14 276 360 342 428
NlpC/P60 family peptidoglycan endopeptidase RipA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFS33417.1 8.40e-185 8 391 2 387
QIF80185.1 8.40e-185 8 391 2 387
CEK36621.1 4.08e-174 6 391 9 392
CEJ75496.1 1.17e-173 6 391 9 392
CEK40080.1 1.65e-173 6 391 9 392

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2K1G_A 1.44e-13 277 390 21 124
SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12]
7CFL_A 3.49e-12 262 390 15 138
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
3NE0_A 1.69e-10 262 360 86 185
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]
3PBC_A 1.69e-10 262 360 86 185
ChainA, Invasion Protein [Mycobacterium tuberculosis]
4Q4T_A 7.99e-10 262 360 344 443
Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q65NQ9 4.52e-48 247 391 310 452
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=cwlO PE=3 SV=1
P40767 5.09e-46 261 391 343 473
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlO PE=1 SV=2
P45296 2.54e-13 226 390 42 183
Probable endopeptidase NlpC homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=nlpC PE=3 SV=1
P0AFV7 9.68e-13 235 390 31 185
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Shigella flexneri OX=623 GN=mepS PE=3 SV=1
P0AFV5 9.68e-13 235 390 31 185
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mepS PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999997 0.000032 0.000000 0.000000 0.000000 0.000003

TMHMM  Annotations      download full data without filtering help

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