logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004371_02187

You are here: Home > Sequence: MGYG000004371_02187

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002251385
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002251385
CAZyme ID MGYG000004371_02187
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1085 120985.46 7.9058
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004371 2690194 MAG Israel Asia
Gene Location Start: 3664;  End: 6921  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.40

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 358 1081 1.2e-219 0.8847087378640777

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 32 885 2 873
alpha-L-rhamnosidase.
pfam00754 F5_F8_type_C 1.40e-05 214 322 17 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEH15986.1 0.0 5 1081 7 1096
QJW88089.1 0.0 21 1083 17 1104
QHW00427.1 0.0 24 1080 29 1110
QJW91251.1 0.0 23 1080 28 1113
AEV33004.1 0.0 21 1080 48 1134

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.39e-265 8 1082 12 1140
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 2.44e-136 7 1078 12 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 6.60e-136 7 1078 12 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 2.91e-110 7 1080 11 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001786 0.996918 0.000269 0.000488 0.000270 0.000235

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004371_02187.