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CAZyme Information: MGYG000004369_01589

You are here: Home > Sequence: MGYG000004369_01589

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-882 sp000435595
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-882; CAG-882 sp000435595
CAZyme ID MGYG000004369_01589
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
529 MGYG000004369_20|CGC2 58428.36 5.5023
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004369 3090795 MAG Israel Asia
Gene Location Start: 25827;  End: 27416  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004369_01589.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 115 476 1.1e-74 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.24e-91 24 518 23 538
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 1.25e-28 93 409 53 342
Probable polygalacturonase
PLN02188 PLN02188 1.86e-28 92 487 36 387
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 2.15e-26 195 472 48 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 1.26e-22 92 411 67 359
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR72585.1 7.90e-264 1 526 1 515
ABX43097.1 3.34e-239 1 529 1 518
BCJ96409.1 2.02e-235 1 526 1 514
QNM03367.1 1.27e-224 1 529 1 518
BCJ93649.1 1.51e-218 1 529 1 518

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.56e-43 93 396 28 347
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 5.37e-38 95 479 47 426
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 2.76e-31 109 470 26 361
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
2UVE_A 2.40e-25 48 439 116 536
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MR0_A 3.60e-07 73 153 89 180
Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 2.05e-53 241 457 30 247
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 2.00e-49 73 477 38 431
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P18192 1.24e-30 109 470 52 387
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 2.32e-30 109 470 52 387
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
P15922 2.16e-26 51 429 114 516
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004369_01589.