logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004282_00235

You are here: Home > Sequence: MGYG000004282_00235

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp000434695
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp000434695
CAZyme ID MGYG000004282_00235
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
914 MGYG000004282_1|CGC2 102087.43 4.7082
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004282 2340138 MAG China Asia
Gene Location Start: 255145;  End: 257889  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004282_00235.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 3 607 1.1e-53 0.5811170212765957

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 6.89e-18 1 471 9 468
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 1.11e-08 7 129 4 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10150 PRK10150 1.86e-06 3 285 11 301
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCO04743.1 0.0 1 909 1 904
AEE64777.1 0.0 1 907 1 895
ADU22163.1 0.0 1 909 1 899
BAV13119.1 0.0 1 909 1 914
ADL53165.1 0.0 1 909 1 914

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 1.41e-10 76 413 72 424
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
O33815 1.27e-08 91 474 142 529
Beta-galactosidase OS=Staphylococcus xylosus OX=1288 GN=lacZ PE=3 SV=1
O52847 6.58e-08 91 413 165 503
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q04F24 6.58e-08 91 390 148 457
Beta-galactosidase OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) OX=203123 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004282_00235.