logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004223_01311

You are here: Home > Sequence: MGYG000004223_01311

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1883 sp900763305
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1883; UMGS1883; UMGS1883; UMGS1883 sp900763305
CAZyme ID MGYG000004223_01311
CAZy Family GH167
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1397 MGYG000004223_9|CGC3 156299.29 4.5453
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004223 2575981 MAG United Kingdom Europe
Gene Location Start: 90823;  End: 95016  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004223_01311.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH167 374 935 1.8e-117 0.7810320781032078

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 8.11e-10 438 708 108 376
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874 GanA 4.04e-08 438 803 130 498
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 1.24e-04 192 294 16 120
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
cd03143 A4_beta-galactosidase_middle_domain 7.70e-04 715 793 1 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam08532 Glyco_hydro_42M 0.006 713 793 1 89
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBH24555.1 2.72e-133 40 939 757 1624
AIQ31958.1 9.41e-132 34 930 598 1459
AIQ43288.1 1.63e-131 34 935 605 1467
QUL53851.1 2.61e-128 34 930 598 1459
ALC81507.1 9.24e-128 40 937 358 1212

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6PTM_A 4.68e-26 478 803 316 652
Crystalstructure of apo exo-carrageenase GH42 from Bacteroides ovatus [Bacteroides ovatus CL02T12C04]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5JGG0 9.37e-08 436 789 118 475
Beta-galactosidase LacZ OS=Weizmannia coagulans OX=1398 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000397 0.998868 0.000228 0.000165 0.000156 0.000155

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004223_01311.