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CAZyme Information: MGYG000004197_00892

You are here: Home > Sequence: MGYG000004197_00892

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A;
CAZyme ID MGYG000004197_00892
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1048 MGYG000004197_13|CGC2 118306.12 5.1805
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004197 2419423 MAG United Kingdom Europe
Gene Location Start: 46905;  End: 50051  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004197_00892.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 327 1039 1.1e-230 0.8847087378640777

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 42 838 4 867
alpha-L-rhamnosidase.
COG3250 LacZ 2.45e-04 882 993 9 131
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
cd03143 A4_beta-galactosidase_middle_domain 7.23e-04 689 764 53 129
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACT93511.1 0.0 33 1048 33 1054
QDO69761.1 0.0 8 1038 6 1041
ANI89646.1 0.0 7 1038 4 1035
QUT78107.1 0.0 15 1038 15 1040
QDM11648.1 0.0 15 1038 15 1040

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.86e-139 16 1038 16 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 2.13e-117 34 1036 31 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 5.66e-117 34 1036 31 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 1.45e-129 34 1038 30 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000415 0.137649 0.861662 0.000103 0.000099 0.000078

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004197_00892.