CAZyme Information: MGYG000004180_03045

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
• CAZyme ID: MGYG000004180_03045
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
619	MGYG000004180_37|CGC1	70199.54	9.1369

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004180	4626686	MAG	United Kingdom	Europe

• Gene Location: Start: 30661; End: 32520 Strand: +

Full Sequence      

MKARILVWLVALLCCHNASFAQKEFVNASARLSGHPRILLQKGEEKALKKVIMKDAVWKD
IHLSLVDEAGEIVKLPLNERIKTGRRLLSVSRENLRRIFILSYAYRMTGKNEFLKRAESE
MLKAASFSDWNPSHFLDVGEMTMALAIGYDWLYPQLSVQTKEVIEKAIVEKGLKPSFDER
YNWFVNAVHNWSQVCHAGVTYGALAIWEKEPELSRTVINRAIDKISIPMGHYAPDGAYPE
GIGYWDYGTSFNAMFLSAIEKAFGTDYGLSELPGFLKTGEYILHAVTPNLKNFAYSDNGG
NAFLAPTMFWFYDKTKDASILYNQVQLYKKDGQKRIKKNRLAPAMLIWGASASLANPQKP
ARLSWMAQGDNPVCFMRSSWNDSSAVYVGMKMGSPSVNHGHMDVGSFLLEADGVLWGMDM
GGEEYNRLETRGVELWNSRQNSQRWDVYRYNNFVHNTLSFNHKYQDVKGKAQIDGYSDQE
NNMYVISDLTPVYKDQVKSAKRAVSLVDKEYVVVEDVIEATKRFTMMTWTMVTPASAKIV
ADNVMLLEKNGKKLYIKVEGPKKVRWHISPAQSEFSYDSPNPGISIIGFDTDLELSAKQS
IRVFLLPGENKNVTYKSVL

Enzyme Prediction     

No EC number prediction in MGYG000004180_03045.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	384	562	3.9e-66	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	1.96e-04	30	212	131	331	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50613.1	0.0	1	619	1	619
QGA22620.1	2.86e-247	1	619	1	618
BCG53903.1	2.28e-239	30	607	26	603
QGY42587.1	6.94e-215	25	609	17	600
QIP14356.1	7.65e-215	21	607	23	609

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	1.49e-06	29	298	133	417	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.49e-06	29	298	133	417	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000498	0.956643	0.042146	0.000239	0.000223	0.000207

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004180_03045.