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CAZyme Information: MGYG000004132_01041

You are here: Home > Sequence: MGYG000004132_01041

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species V9D3004 sp900760345
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; V9D3004 sp900760345
CAZyme ID MGYG000004132_01041
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 44563.75 4.5203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004132 2510246 MAG United Kingdom Europe
Gene Location Start: 4742;  End: 5896  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.156 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 55 375 7e-84 0.934375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 4.28e-88 4 383 2 351
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 1.47e-16 53 378 20 321
Glycosyl hydrolases family 8.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUG57484.1 1.07e-212 1 384 1 376
CUH93484.1 2.14e-210 1 384 1 377
BCZ45330.1 2.99e-208 3 384 2 378
AGF58608.1 3.48e-207 3 384 2 378
AQR97299.1 3.48e-207 3 384 2 378

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5YXT_A 5.03e-181 2 383 5 376
Glycosidehydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_B Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_C Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_D Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22]
1WU4_A 1.05e-176 2 383 6 379
ChainA, xylanase Y [Halalkalibacterium halodurans C-125],1WU5_A Chain A, xylanase Y [Halalkalibacterium halodurans C-125]
3A3V_A 4.27e-176 2 383 6 379
ChainA, Xylanase Y [Halalkalibacterium halodurans]
2DRR_A 6.06e-176 2 383 6 379
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
1WU6_A 8.59e-176 2 383 6 379
ChainA, xylanase Y [Halalkalibacterium halodurans C-125]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9KB30 4.34e-176 2 383 6 379
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A0A0S2UQQ5 3.09e-174 2 383 6 380
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
A1A048 1.88e-136 12 381 14 377
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
P37701 3.29e-21 60 380 93 389
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
P37699 4.98e-20 60 380 93 389
Endoglucanase C OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCC PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004132_01041.