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CAZyme Information: MGYG000004116_01590

You are here: Home > Sequence: MGYG000004116_01590

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004116_01590
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
519 MGYG000004116_8|CGC1 57289.42 4.6859
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004116 3787047 MAG United Kingdom Europe
Gene Location Start: 39937;  End: 41496  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004116_01590.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 251 501 2e-32 0.6553846153846153

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.52e-10 269 423 254 397
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 7.08e-09 301 515 241 422
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 7.15e-05 241 502 74 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 0.002 287 331 211 256
Probable polygalacturonase
PLN03010 PLN03010 0.003 269 383 149 308
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63342.1 6.41e-119 59 518 50 528
QNK57052.1 1.23e-113 75 518 50 487
BCI63341.1 1.89e-110 59 510 276 741
QNK57056.1 1.89e-101 59 515 39 490
AZS17008.1 1.68e-100 59 516 57 507

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000006 1.000024 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004116_01590.