CAZyme Information: MGYG000004022_01587

Basic Information

• Species: HGM13222 sp900757485
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; HGM13222; HGM13222 sp900757485
• CAZyme ID: MGYG000004022_01587
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
850	MGYG000004022_11|CGC2	96247.39	4.7852

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004022	2646660	MAG	United Kingdom	Europe

• Gene Location: Start: 24576; End: 27128 Strand: +

Full Sequence      

MQKAYRIRVAKTATDLLDNKALVWDSGVVEAENSSCIVYAGEPLHSKTRYWWQTEMTLTD
DTVLHTGTEWFETAILSADEWKAKWISVPVHRFGVTDLFRKSFRLESAPVSGRLYISGIG
YYEAFLNGCKIGDRVLEPGWTDYRKHVLYSVYDITDMLCAGENTLGIELAEGWYGMRHPS
FDLFMGKQPDWNGTPRLILEADIFLENGKQIHLISGKDSGFSVSPGAVRENSVYDGEIYD
ARLAQPGWNCNGFVETEWEKAVEAERPGGVLSAQQMPPIRVNRRWAAVSKKTLSNSVVAD
FGQNFAGWVAVKVKGNPGSKLTIRYGETLKPDGSVNQDNLRGAKARDVYILNGNGEEEWH
PRFTYHGFRYAQLEPDGDVQLIDVEAQAVYTDVQETGGFDCSEEILNRCFEMMLRTECSN
MHSVPTDCPQRDERMAWLNDVTVRCEEAIYNFDLRLFYEKWLDDIADAQLPAGSIPDTAP
YVYCGNPSFHISSCFVLIPWLLYCHYGDKTALEKHYEQMKRYVSFLASQRGEDGVIGAPY
FGEWAPPAAECDQQSPWSAEPVNIPPGTISTGYLAYDCVIMKKAAAVMNRSEDIPAFERL
FSETTEAINRKYYDAEKGYYVPGSQAVNIFPLLLEFTPDPLRTQKQLLDDLTAHEYHITT
GNQMTKYWFELLDKLNLNDVALRMATDTGYPSLGYMAENGATTLWERWENLDGSGMNSHN
HPMNGAYTVWYYKTLAGIKRTGNGRVTLHPAINLDIAEVKAELQTPKGKLAVAFQKTTDF
TAVYVTVPFNTQADIELPLDCIACLEENQEVLWRRAENMENTETVFCLSRSAGEYHFILR
RDKEKESGRQ

Enzyme Prediction     

No EC number prediction in MGYG000004022_01587.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	291	797	4.1e-144	0.9940476190476191
CBM67	83	268	5.4e-29	0.9715909090909091

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.01e-91	395	735	2	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	8.81e-59	108	281	2	170	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	7.44e-36	290	390	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	2.14e-04	737	800	1	66	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA22854.1	1.49e-194	1	808	67	862
AEE96386.1	4.93e-187	2	841	44	890
QEC51112.1	1.88e-185	2	798	105	896
VEH16339.1	1.20e-183	2	798	67	854
AEF82974.1	7.15e-180	2	839	44	876

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	2.50e-176	2	839	66	941	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A	1.36e-103	100	800	306	997	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	5.06e-102	2	798	38	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNB2	4.38e-126	2	810	70	891	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
T2KPL4	3.64e-108	2	797	66	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	5.93e-103	100	800	306	997	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
P9WF03	2.03e-102	2	850	67	920	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999844	0.000196	0.000002	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004022_01587.