CAZyme Information: MGYG000004003_04010

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004003_04010
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
867	MGYG000004003_109|CGC1	99039.98	8.4099

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004003	5653807	MAG	United Kingdom	Europe

• Gene Location: Start: 16; End: 2619 Strand: +

Full Sequence      

MKKVLLISFVILSAAAQMTYAQKQAVIKLMETTLMHEMRATPYPLDKAVVNDRAVSFQWP
LRSDMNSQDSPLDGFEHKVKKVDKTKVTYRLRYSQDAGFKSGITQVDTRWPFYNPEKPLA
PGVWYWQFGYMEDGQVVWGSTQQVTVEDRPGKFCPPSLKALLAKLPADHPRVWIMKDEWK
DFMNRSKEKAERQWYLERADKVLQTPMKSVKDINTSQVKNLKNEMQINSYLTRESRRIID
AEEGNTEALIRAWLLTQDTKYADEAIKRVLIMAGWDKDKNVKGDFNASTLLSLCSMAYDS
FYDRLSAAQKKTLFDEIRVKGGEMYDNFNNRMENHIADNHVWQMTLRILTMAAFSVYGDL
PEANTWVDYCYNVWLARFPGLNKDGGWHNGDSYFTVNTRTLIEVPYYYSKLTGYDFFSDP
WYQGNIMYTIFQQPPFSKSGGNGSSHQNVGRPNSIRIGYLDALARLTGNTYAADFVRRTL
KVEPEYMKKALLNKPGDLAWFRLQCDKPLLEGEGLTALPAGYVFPETGLASFQTNWDRVG
GNAMWSFRSSPYGSTSHALANQNAFNTFYGGQPLFYSSGHHIEFTDVHSMLCHRATRAHN
SILVNGMGQRIGTEGYGWIPRYYASEKIGYVLGDASNAYGKVISPLWLTRGEQSEVHYTP
ENGWDENHVKTFRRHIVNLGKTGLIFVYDELVADEPVNWNYLLHTTANPMTVNKSDNRFV
HIQATNRGGASDAYLFSSGTLQTDTTSSFFYPAENWLRADDKGNFKKYPNHWHFTATSEK
AQVYRFATIINTHALKYPAKDPEILSDGRIKVGGWLISVNLKPNGAPSFFIRSTKENVNI
TYKGEATIVSEDGYETVMRDTLPELEI

Enzyme Prediction     

No EC number prediction in MGYG000004003_04010.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	540	691	1.2e-95	0.967948717948718

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	32	507	1	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	3.37e-05	524	710	9	171	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94210.1	0.0	1	867	1	867
QNL40847.1	0.0	1	867	1	867
QUT78348.1	0.0	1	867	1	867
QDM11437.1	0.0	1	867	1	867
QUR44694.1	0.0	1	867	1	867

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	1.94e-277	21	867	20	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.43e-274	21	867	20	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.16e-44	89	807	53	751	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.12e-43	89	807	53	751	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000377	0.998925	0.000212	0.000171	0.000162	0.000154

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004003_04010.