CAZyme Information: MGYG000003957_02320

Basic Information

• Species: Parabacteroides sp014287585
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
• CAZyme ID: MGYG000003957_02320
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
583	MGYG000003957_47|CGC1	65000.52	6.5648

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003957	4724401	MAG	United Kingdom	Europe

• Gene Location: Start: 23870; End: 25621 Strand: -

Full Sequence      

MKKLFILISLFISVPLFAQQRDSRVREYLPPARIVWQQESQLIQGADHLLLPGNGQSDLA
NRSICRLTSTERQHPAILFDFGKELQGGLQIVTGMPASHEPIAIRVRFGESASEAMCEID
GVNGATNDHAMRDFTIRLPWLGVMEVGNSGFRFVRIDLLDDSAELHLKEVRAISTFRDIP
YKGSFRSNDGRLNKIWQTGAYTVHLNMQEYLWDGIKRDRLVWVGDLHPEVMTVNTVFGYN
EVVPKSLDLIRDITPLPGWMNGMCSYSIWWLLIQRDWYYYQGDLAYLKEQRDYLTGLLRL
LISKVGEDGVEKLDGGGRFLDWPSSENPVAIDAGLQALMLQAMKAGGELCKVLGEDTLAT
ECEAVKSRMTKAASKVIKPFLKSGVAPDAPGSKQAASLLALAGLMKPEEADQKYLAVNGG
HGFSTFYGYYMLRAMAAAGNYQGAIDVIRQYWGAMIDLGATTFWEDFNLDWLPGASRIDE
PVPAGKKDVHGGYGAYCYKGFRHSLCHGWASGPTSWLSEYVLGVQVVEPGCRVVRITPHL
GDLEWVEGTFPTPYGVITIRHEKGVDGKVRSRIDAPSEVKVLR

Enzyme Prediction     

No EC number prediction in MGYG000003957_02320.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	74	580	4.7e-103	0.9781746031746031

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	8.33e-13	183	521	4	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.35e-06	523	580	1	58	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT48045.1	0.0	1	583	1	583
QUR50485.1	0.0	2	581	3	580
QUT19201.1	0.0	2	581	3	580
ABR43079.1	0.0	2	581	3	580
QRO16730.1	0.0	2	581	3	580

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	1.12e-43	67	559	184	674	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4XHC_A	7.94e-19	76	522	94	543	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000236	0.999106	0.000181	0.000156	0.000152	0.000134

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003957_02320.