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CAZyme Information: MGYG000003885_01390

You are here: Home > Sequence: MGYG000003885_01390

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000003885_01390
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
866 MGYG000003885_92|CGC1 94147.29 4.5727
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003885 2105502 MAG United States North America
Gene Location Start: 1911;  End: 4511  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003885_01390.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 860 1.9e-65 0.9648058252427184

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 6.48e-05 411 586 579 755
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 13 866 4 855
AZH68834.1 0.0 1 861 1 863
QNM10672.1 5.81e-298 1 859 1 832
AGF57028.1 3.54e-239 6 860 5 846
APQ61832.1 1.67e-193 6 859 5 867

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 7.86e-06 419 863 653 1142
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000016 0.000012 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003885_01390.