CAZyme Information: MGYG000003872_01901

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Clostridium_A
• CAZyme ID: MGYG000003872_01901
• CAZy Family: GH127
• CAZyme Description: Non-reducing end beta-L-arabinofuranosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
658	MGYG000003872_30|CGC1	75314.17	4.9576

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003872	2901403	MAG	United States	North America

• Gene Location: Start: 9893; End: 11869 Strand: -

Full Sequence      

MSRYHNSIPGKVSDFEITDHFWSNMMEKVRTQVIPYQWKALNDQIQDADPSFCIKNFRVA
AEITQKNLTTFEEKAKAGSFNGEVFQDSDLAKWLEAVSYSLQTHPDDNLEEIADEVIDLI
CASQQSDGYFDTYYIINGLEKRFTNLKDNHELYVLGHMTEAAVAYYHATGKDKFLNVVIR
AIECVDQHIGIEEGKIHGYPGHEILEMALVRLYEITKNPEHIKLAEYFINERGKSPLFFE
QETKENGNGFKWENSYFQYQYYQAGLPVREQMKAEGHAVRAVYLYSGIADVAGVTENEEL
ISVCRRLWKNIVTKQMYITGGIGQQQHGEAFTYDYDLPNDTVYAETCASIGLAFFAKRMF
RLEHDSQYMDVLERALFNGIISGMALDGRSFFYVNPLEVVPEACEKDYLRSHVKPQRQKW
FACACCPPNIARLLTSIGSYIFMLDDSELYINLYMSGKLNTNLASQDVSIVSKTNYPWNG
KVSFTLELKEDANFTLALRIPGWCEQYQIEVNGKPASYELVKGYAKITGTWTDGDAVELI
MNMPVTVNVSNPKVRENIGRIAISRGPIVYCLEEADNGKDLHMISLGQDPSFRCEHTDDL
DGCTVIYSKGRRIINSFGEDQLYANKTKTVYENQNLKWIPYYAWANRGIGEMLVWVHE

Enzyme Prediction     

No EC number prediction in MGYG000003872_01901.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	16	571	1.3e-221	0.9961832061068703

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3533	COG3533	0.0	17	658	14	587	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944	Glyco_hydro_127	2.70e-175	14	571	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCZ47937.1	4.33e-294	1	656	1	646
AQS05105.1	1.41e-287	7	658	7	648
AVK51332.1	2.32e-286	7	658	7	648
AJG99734.1	9.39e-286	7	658	7	648
AIU03254.1	3.80e-285	9	658	9	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	2.64e-224	13	658	14	647	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	2.98e-218	13	658	14	647	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	4.54e-160	17	654	5	654	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	6.38e-160	17	654	5	654	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A	1.80e-159	17	654	5	654	ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	2.48e-159	17	654	5	654	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000083	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003872_01901.