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CAZyme Information: MGYG000003779_00940

You are here: Home > Sequence: MGYG000003779_00940

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stomatobaculum sp002892395
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Stomatobaculum; Stomatobaculum sp002892395
CAZyme ID MGYG000003779_00940
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
565 MGYG000003779_10|CGC1 64961.79 6.5278
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003779 1364353 MAG Canada North America
Gene Location Start: 2091;  End: 3788  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003779_00940.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 276 549 9.5e-37 0.8378378378378378

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 6.37e-66 262 558 8 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 5.51e-39 282 560 129 420
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
smart00636 Glyco_18 6.35e-27 277 548 23 332
Glyco_18 domain.
pfam00704 Glyco_hydro_18 3.44e-24 292 548 48 305
Glycosyl hydrolases family 18.
cd06549 GH18_trifunctional 2.57e-22 272 555 16 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK78586.1 5.21e-157 6 565 2 565
AYA98746.1 2.65e-155 36 559 32 548
QRV18839.1 1.10e-149 6 563 2 553
ADL02970.1 1.10e-149 6 563 2 553
SEU04925.1 1.24e-148 6 562 2 553

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JH8_A 2.23e-19 312 555 59 307
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3K_A 5.74e-19 273 560 128 425
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
3CZ8_A 6.60e-17 332 547 89 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4Q6T_A 4.43e-08 320 555 80 332
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]
6BT9_A 2.81e-06 278 547 124 445
ChitinaseChiA74 from Bacillus thuringiensis [Bacillus thuringiensis],6BT9_B Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 3.77e-25 271 556 43 337
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 7.24e-18 303 561 156 422
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O05495 2.88e-16 332 547 181 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
Q9K3E4 1.73e-15 322 558 179 420
Cortical fragment-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleL PE=1 SV=1
Q9W5U2 2.37e-09 271 550 1436 1753
Probable chitinase 10 OS=Drosophila melanogaster OX=7227 GN=Cht10 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.501743 0.485341 0.009318 0.001207 0.000463 0.001927

TMHMM  Annotations      download full data without filtering help

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