logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003734_01294

You are here: Home > Sequence: MGYG000003734_01294

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Afipia broomeae
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Afipia; Afipia broomeae
CAZyme ID MGYG000003734_01294
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 MGYG000003734_15|CGC2 55058.63 9.214
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003734 5238503 MAG Canada North America
Gene Location Start: 57277;  End: 58785  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003734_01294.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 20 382 3.3e-19 0.6555555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13231 PMT_2 1.15e-15 62 222 1 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1807 ArnT 1.15e-05 21 417 11 425
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCE26039.1 1.10e-40 16 498 22 523
VIP08413.1 4.07e-15 29 498 43 514
AEV34737.1 4.56e-11 45 331 53 344
QUS55760.1 7.63e-10 45 368 53 381
QPB22219.1 2.84e-07 41 222 410 591

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
15 37
135 154
169 191
198 220
247 269
290 312
317 339
346 368